RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 EPPINO95925 133 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 PPYP01298 95 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 AQP1P29972 269 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 PSMB2P49721 201 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 HERVK_113P61574 105 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 PAX8Q06710 450 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 LAGE3Q14657 143 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 ZNF56Q15929 161 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 ZNF726P1Q15940 193 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 FAM120AOSQ5T036 256 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 FHL5Q5TD97 284 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 Q6YL49 198 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 COX8CQ7Z4L0 72 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 SPATA3Q8NHX4 192 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 ZNF799Q96GE5 643 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 C11orf1Q9H5F2 150 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 DYNLRB1Q9NP97 96 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 SELENOKQ9Y6D0 94 aa4.82□□□□□ -1.64
TDP1-215ENST00000556498 DLEC1Q9Y238 1755 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 DDTLA6NHG4 134 aaPredicted RBP4.81□□□□□ -1.64
TDP1-215ENST00000556498 CRYM-AS1A6NIL9 109 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 C17orf51A8MQB3 221 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 C11orf94C9JXX5 98 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 SLC25A20O43772 301 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 BCE1O60756 84 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 SS18L1O75177 396 aaPredicted RBP4.81□□□□□ -1.64
TDP1-215ENST00000556498 LIM2P55344 173 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 TMEM52BQ4KMG9 183 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 CENPWQ5EE01 88 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 WDR86Q86TI4 376 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 MORN4Q8NDC4 146 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 RFESDQ8TAC1 157 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 CNRIP1Q96F85 164 aaPredicted RBP4.81□□□□□ -1.64
TDP1-215ENST00000556498 UPK3BQ9BT76 320 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 MCM3APO60318 1980 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 ALPK3Q96L96 1907 aa4.81□□□□□ -1.64
TDP1-215ENST00000556498 NUP205Q92621 2012 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 TICRRQ7Z2Z1 1910 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 WI2-2373I1.2A0A1W2PRP0 233 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 SMIM27A0A1W2PRY6 76 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 J3QT63 122 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 SPRY3O43610 288 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 NDUFC1O43677 76 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 NXPH3O95157 252 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 LYPD3O95274 346 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 IGKV1D-16P01601 117 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 HBDP02042 147 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 ZNF136P52737 540 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 RPL18Q07020 188 aaKnown RBP4.8□□□□□ -1.64
TDP1-215ENST00000556498 ORMDL2Q53FV1 153 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 Q6ZPA2 131 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 C4orf45Q96LM5 186 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 FRG2BQ96QU4 278 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 CXXC4Q9H2H0 198 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 CALYQ9NYX4 217 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 DOCK3Q8IZD9 2030 aa4.8□□□□□ -1.64
TDP1-215ENST00000556498 TRBV27A0A0K0K1C4 114 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 MED19A0JLT2 244 aaPredicted RBP4.79□□□□□ -1.64
TDP1-215ENST00000556498 C8orf87E5RJ46 101 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 H3BMM0 161 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 SMIM22K7EJ46 135 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 SRSF10O75494 262 aaKnown RBP4.79□□□□□ -1.64
TDP1-215ENST00000556498 MGST1P10620 155 aaKnown RBP4.79□□□□□ -1.64
TDP1-215ENST00000556498 CD59P13987 128 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 DYNLT3P51808 116 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 SYNJ2BPP57105 145 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 FAM104BQ5XKR9 115 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 MARCH3Q86UD3 253 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 SFTPA2Q8IWL1 248 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 UBE2WQ96B02 151 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 C18orf12Q96KH6 178 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 KAT6AQ92794 2004 aa4.79□□□□□ -1.64
TDP1-215ENST00000556498 SNRPD3P62318 126 aaKnown RBP4.78□□□□□ -1.64
TDP1-215ENST00000556498 HBBP68871 147 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 ZNF816Q0VGE8 651 aaPredicted RBP4.78□□□□□ -1.64
TDP1-215ENST00000556498 C1orf100Q5SVJ3 147 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 Q8N1X5 172 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 OR8A1Q8NGG7 326 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 METTL26Q96S19 204 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 PLA2G12AQ9BZM1 189 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 SLC25A15Q9Y619 301 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 V9GYV3 84 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 LOC285556D6RIA3 1793 aa4.78□□□□□ -1.64
TDP1-215ENST00000556498 NUP210Q8TEM1 1887 aaPredicted RBP4.77□□□□□ -1.65
TDP1-215ENST00000556498 COL4A5P29400 1685 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 TTC3P53804 2025 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 A0A1B0GWA3 101 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 SRRM4A7MD48 611 aaKnown RBP4.77□□□□□ -1.65
TDP1-215ENST00000556498 H3BVH4 76 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 K7ERJ3 54 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 OVOL3O00110 214 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 EFNA4P52798 201 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 GNB1P62873 340 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 ATXN8Q156A1 80 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 TMEM155Q4W5P6 130 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 PCSK4Q6UW60 755 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 GGNQ86UU5 652 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 RPRMLQ8N4K4 120 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 RPP25LQ8N5L8 163 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms