RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CTDSP2O14595 271 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 GATA2P23769 480 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-219ENST00000556432 TAS2R19P59542 299 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 FAAP20Q6NZ36 180 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 STEAP1BQ6NZ63 245 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 THAP8Q8NA92 274 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 OR1S1Q8NH92 325 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 BCL7BQ9BQE9 202 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 EXTL2Q9UBQ6 330 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 TRAV9-2A0A087WT02 112 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 RGS5O15539 181 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 IAPPP10997 89 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 RPL7P18124 248 aaKnown RBP9.49□□□□□ -0.89
ACTN1-219ENST00000556432 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 MZT2AQ6P582 158 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 Q6ZTI0 123 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 CCDC190Q86UF4 302 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 TMEM229BQ8NBD8 167 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 RPUSD4Q96CM3 377 aaKnown RBP9.49□□□□□ -0.89
ACTN1-219ENST00000556432 VSIG2Q96IQ7 327 aa9.49□□□□□ -0.89
ACTN1-219ENST00000556432 SLIRPQ9GZT3 109 aaKnown RBP9.49□□□□□ -0.89
ACTN1-219ENST00000556432 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 J3KRW8 73 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 AKR1C4P17516 323 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 CXCL3P19876 107 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 RAP2BP61225 183 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 AKR1C1Q04828 323 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 PSG3Q16557 428 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 IL22RA2Q969J5 263 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 C20orf144Q9BQM9 153 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 TMEM70Q9BUB7 260 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 PARD6GQ9BYG4 376 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-219ENST00000556432 RSL24D1Q9UHA3 163 aaKnown RBP9.48□□□□□ -0.89
ACTN1-219ENST00000556432 KCNIP3Q9Y2W7 256 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 ICOSQ9Y6W8 199 aa9.48□□□□□ -0.89
ACTN1-219ENST00000556432 KRTAP29-1A8MX34 341 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-219ENST00000556432 DISC1C4P0D8 188 aa9.47□□□□□ -0.89
ACTN1-219ENST00000556432 NPIPB6E9PJ23 425 aa9.47□□□□□ -0.89
ACTN1-219ENST00000556432 H3BRN7 92 aa9.47□□□□□ -0.89
ACTN1-219ENST00000556432 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
ACTN1-219ENST00000556432 SURF2Q15527 256 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-219ENST00000556432 GFI1BQ5VTD9 330 aa9.47□□□□□ -0.89
ACTN1-219ENST00000556432 LYZL2Q7Z4W2 148 aa9.47□□□□□ -0.89
ACTN1-219ENST00000556432 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
ACTN1-219ENST00000556432 MSRB1Q9NZV6 116 aa9.47□□□□□ -0.89
ACTN1-219ENST00000556432 HIGD1AQ9Y241 93 aa9.47□□□□□ -0.89
ACTN1-219ENST00000556432 A0A0B4J2A0 478 aa9.46□□□□□ -0.9
ACTN1-219ENST00000556432 PAX4O43316 350 aa9.46□□□□□ -0.9
ACTN1-219ENST00000556432 TMEM182Q6ZP80 229 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-219ENST00000556432 SHPKQ9UHJ6 478 aa9.46□□□□□ -0.9
ACTN1-219ENST00000556432 LY96Q9Y6Y9 160 aa9.46□□□□□ -0.9
ACTN1-219ENST00000556432 TRGV1A0A0A0MS02 117 aa9.45□□□□□ -0.9
ACTN1-219ENST00000556432 SMCO3A2RU48 225 aa9.45□□□□□ -0.9
ACTN1-219ENST00000556432 OR5G3P0C626 314 aa9.45□□□□□ -0.9
ACTN1-219ENST00000556432 MCFD2Q8NI22 146 aa9.45□□□□□ -0.9
ACTN1-219ENST00000556432 TRAV12-3A0A0B4J271 114 aa9.44□□□□□ -0.9
ACTN1-219ENST00000556432 PSCAO43653 123 aa9.44□□□□□ -0.9
ACTN1-219ENST00000556432 HYPMO75409 117 aa9.44□□□□□ -0.9
ACTN1-219ENST00000556432 IL5P05113 134 aa9.44□□□□□ -0.9
ACTN1-219ENST00000556432 ANXA7P20073 488 aaKnown RBP9.44□□□□□ -0.9
ACTN1-219ENST00000556432 RPP30P78346 268 aaKnown RBP9.44□□□□□ -0.9
ACTN1-219ENST00000556432 DAZ2Q13117 558 aaKnown RBP9.44□□□□□ -0.9
ACTN1-219ENST00000556432 LINC00467Q9BRT7 94 aa9.44□□□□□ -0.9
ACTN1-219ENST00000556432 PLA2G2DQ9UNK4 145 aa9.44□□□□□ -0.9
ACTN1-219ENST00000556432 GPR132Q9UNW8 380 aa9.44□□□□□ -0.9
ACTN1-219ENST00000556432 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
ACTN1-219ENST00000556432 A0A087X0K7 114 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 IGHV3-53P01767 116 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 EVI2AP22794 236 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 SRPXP78539 464 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 S100A7AQ86SG5 101 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 DEFB104AQ8WTQ1 72 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 C15orf40Q8WUR7 153 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 DIRAS2Q96HU8 199 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 GSN-AS1Q9NRJ2 163 aa9.43□□□□□ -0.9
ACTN1-219ENST00000556432 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
ACTN1-219ENST00000556432 LINC00869P0C866 280 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 AKAIN1P0CW23 69 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 ANXA3P12429 323 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 TNFSF8P32971 234 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 IL18Q14116 193 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 CYP2G1PQ6ZSU1 146 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 ACOT7LQ6ZUV0 252 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 OR51S1Q8NGJ8 323 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 NTN5Q8WTR8 489 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-219ENST00000556432 CIB3Q96Q77 187 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-219ENST00000556432 PRRT1Q99946 306 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
ACTN1-219ENST00000556432 HMCN2Q8NDA2 5059 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 PMS2P5A8MQ11 134 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 WRBO00258 174 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 ZNF324O75467 553 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-219ENST00000556432 MED6O75586 246 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 LEPP41159 167 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 SPANXN5Q5MJ07 72 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 LYPD5Q6UWN5 251 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 LCN15Q6UWW0 184 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
ACTN1-219ENST00000556432 ZNF680Q8NEM1 530 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms