RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ERVK-16P61578 105 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 DAD1P61803 113 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 SNRPD3P62318 126 aaKnown RBP3.36□□□□□ -1.87
ATXN3-239ENST00000556315 RPL24P83731 157 aaKnown RBP3.36□□□□□ -1.87
ATXN3-239ENST00000556315 DHRS2Q13268 280 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 OPCMLQ14982 345 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 CDNFQ49AH0 187 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 PSMG4Q5JS54 123 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 TMEM69Q5SWH9 247 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 OR2T35Q8NGX2 323 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 LHFPL5Q8TAF8 219 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 LRRC20Q8TCA0 184 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 LGALS14Q8TCE9 139 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 RBPMSQ93062 196 aaKnown RBP3.36□□□□□ -1.87
ATXN3-239ENST00000556315 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 NARS2Q96I59 477 aaKnown RBP3.36□□□□□ -1.87
ATXN3-239ENST00000556315 METTL26Q96S19 204 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 COMMD9Q9P000 198 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 MDFICQ9P1T7 246 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 MTFP1Q9UDX5 166 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 ANXA10Q9UJ72 324 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 PRNDQ9UKY0 176 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 A0A1B0GU03 582 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 A0A1W2PPQ1 181 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 KRASP01116 189 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 IGHV3-48P01763 117 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 HBE1P02100 147 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 AKAIN1P0CW23 69 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 CXCL3P19876 107 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 FCGR2CP31995 323 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 OR10A3P58181 314 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 TAS2R19P59542 299 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 UBE2MP61081 183 aaKnown RBP3.35□□□□□ -1.87
ATXN3-239ENST00000556315 TSPAN5P62079 268 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 ERHP84090 104 aaKnown RBP3.35□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF345Q14585 488 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 MEF2DQ14814 521 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 USF2Q15853 346 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-239ENST00000556315 TTC32Q5I0X7 151 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 HES5Q5TA89 166 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 COMMD7Q86VX2 200 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 TMEM229BQ8NBD8 167 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 OR11H4Q8NGC9 324 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 PINX1Q96BK5 328 aaKnown RBP3.35□□□□□ -1.87
ATXN3-239ENST00000556315 SLC25A38Q96DW6 304 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 ATG5Q9H1Y0 275 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 NSG2Q9Y328 171 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 GOLT1BQ9Y3E0 138 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 YTHDF2Q9Y5A9 579 aaKnown RBP3.35□□□□□ -1.87
ATXN3-239ENST00000556315 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
ATXN3-239ENST00000556315 SMIM30A4D0T7 59 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 TEX46H3BTG2 121 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 TSC22D2O75157 780 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 MPC2O95563 127 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 PPYP01298 95 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 IFNA5P01569 189 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 SMR3BP02814 79 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-239ENST00000556315 SLC25A4P12235 298 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 HLA-DRB4P13762 266 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 F2RP25116 425 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 PRSS3P35030 304 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 LPAR6P43657 344 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 NKX2-1P43699 371 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-239ENST00000556315 CCR6P51684 374 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 TAS2R20P59543 309 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 HSPE1P61604 102 aaKnown RBP3.34□□□□□ -1.87
ATXN3-239ENST00000556315 DLK1P80370 383 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 CYCSP99999 105 aaKnown RBP3.34□□□□□ -1.87
ATXN3-239ENST00000556315 OR2F1Q13607 317 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 CLINT1Q14677 625 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 RRN3P1Q2M238 152 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 AADACL3Q5VUY0 350 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 SSX7Q7RTT5 188 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 SLC24A4Q8NFF2 622 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 OR51H1Q8NH63 302 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 GPX8Q8TED1 209 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 TMEM230Q96A57 120 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 C17orf77Q96MU5 243 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 SCGB3A2Q96PL1 93 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 UHRF2Q96PU4 802 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 PRRT1Q99946 306 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 SLC5A7Q9GZV3 580 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 HLA-DRB4X5D2U9 266 aa3.34□□□□□ -1.87
ATXN3-239ENST00000556315 A0A0B4J2A0 478 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 TEX13DA0A0J9YY54 714 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-239ENST00000556315 RAB19A4D1S5 217 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 LYRM9A8MSI8 78 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 DISC1C4P0D8 188 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 F5H768 121 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 G3V3Q6 166 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 SMLR1H3BR10 107 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 CLN5O75503 358 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 SCGB2A1O75556 95 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 PGLYRP1O75594 196 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-239ENST00000556315 NMBP08949 121 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 G6PCP35575 357 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms