RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 RNASE8Q8TDE3 154 aaKnown RBP10.73□□□□□ -0.69
SUPT16H-205ENST00000556217 RXFP4Q8TDU9 374 aa10.73□□□□□ -0.69
SUPT16H-205ENST00000556217 C20orf144Q9BQM9 153 aa10.73□□□□□ -0.69
SUPT16H-205ENST00000556217 UPK3BQ9BT76 320 aa10.73□□□□□ -0.69
SUPT16H-205ENST00000556217 LINC00869P0C866 280 aa10.72□□□□□ -0.69
SUPT16H-205ENST00000556217 SMIM18P0DKX4 95 aa10.72□□□□□ -0.69
SUPT16H-205ENST00000556217 SELENOTP62341 195 aa10.72□□□□□ -0.69
SUPT16H-205ENST00000556217 CCDC28AQ8IWP9 274 aa10.72□□□□□ -0.69
SUPT16H-205ENST00000556217 RPUSD4Q96CM3 377 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-205ENST00000556217 KRTAP1-5Q9BYS1 174 aa10.72□□□□□ -0.69
SUPT16H-205ENST00000556217 CCDC59Q9P031 241 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-205ENST00000556217 H3BNG1 76 aa10.71□□□□□ -0.69
SUPT16H-205ENST00000556217 H3BP45 60 aa10.71□□□□□ -0.69
SUPT16H-205ENST00000556217 ZNF701M0R085 212 aaPredicted RBP10.71□□□□□ -0.69
SUPT16H-205ENST00000556217 AP3S2P59780 193 aa10.71□□□□□ -0.69
SUPT16H-205ENST00000556217 PLP1P60201 277 aa10.71□□□□□ -0.69
SUPT16H-205ENST00000556217 KRTAP10-2P60368 255 aa10.71□□□□□ -0.69
SUPT16H-205ENST00000556217 UHRF2Q96PU4 802 aa10.71□□□□□ -0.69
SUPT16H-205ENST00000556217 A0A0J9YY99 117 aa10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 FABP12A6NFH5 140 aa10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 EPM2AB3EWF7 344 aa10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 RLN2P04090 185 aa10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 HOXB5P09067 269 aa10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 INAFM2P0DMQ5 153 aa10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 CXCL2P19875 107 aa10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 ANXA7P20073 488 aaKnown RBP10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 LINC00612Q8N6U2 182 aa10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 SLC25A21Q9BQT8 299 aaPredicted RBP10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 MRPS16Q9Y3D3 137 aaKnown RBP10.7□□□□□ -0.7
SUPT16H-205ENST00000556217 SNURFLB1AK76 121 aa10.69□□□□□ -0.7
SUPT16H-205ENST00000556217 SFT2D2O95562 160 aa10.69□□□□□ -0.7
SUPT16H-205ENST00000556217 ESRGQ1W209 222 aa10.69□□□□□ -0.7
SUPT16H-205ENST00000556217 LCN15Q6UWW0 184 aa10.69□□□□□ -0.7
SUPT16H-205ENST00000556217 DYNC2LI1Q8TCX1 351 aa10.69□□□□□ -0.7
SUPT16H-205ENST00000556217 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
SUPT16H-205ENST00000556217 MRPS26Q9BYN8 205 aaKnown RBP10.69□□□□□ -0.7
SUPT16H-205ENST00000556217 ARL6Q9H0F7 186 aa10.69□□□□□ -0.7
SUPT16H-205ENST00000556217 GAGE12BA1L429 117 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 PMS2P5A8MQ11 134 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 GAGE7O76087 117 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 GAGE12FP0CL80 117 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 GAGE12GP0CL81 117 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 GAGE12IP0CL82 117 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 HOXA5P20719 270 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 DLK1P80370 383 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 PXDC1Q5TGL8 231 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 TOMM5Q8N4H5 51 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 SOSTQ9BQB4 213 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 SLC50A1Q9BRV3 221 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 ZNF586Q9NXT0 402 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 PSENENQ9NZ42 101 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 PTTG2Q9NZH5 202 aa10.68□□□□□ -0.7
SUPT16H-205ENST00000556217 TNFSF8P32971 234 aa10.67□□□□□ -0.7
SUPT16H-205ENST00000556217 BCL7BQ9BQE9 202 aa10.67□□□□□ -0.7
SUPT16H-205ENST00000556217 ARV1Q9H2C2 271 aa10.67□□□□□ -0.7
SUPT16H-205ENST00000556217 NPVFQ9HCQ7 196 aa10.67□□□□□ -0.7
SUPT16H-205ENST00000556217 ZNF331Q9NQX6 463 aaPredicted RBP10.67□□□□□ -0.7
SUPT16H-205ENST00000556217 FNDC10F2Z333 226 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 K7EPK0 472 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 EREGO14944 169 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 PRB4P10163 310 aaPredicted RBP10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 POLR2GP62487 172 aaKnown RBP eCLIP10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 ID3Q02535 119 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 TEPPQ6URK8 271 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 CCDC190Q86UF4 302 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 MCFD2Q8NI22 146 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 DEDD2Q8WXF8 326 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 MGAT4CQ9UBM8 478 aa10.66□□□□□ -0.7
SUPT16H-205ENST00000556217 GOSR2O14653 212 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 MRPS12O15235 138 aaKnown RBP10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 SSSCA1O60232 199 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 TMBIM6P55061 237 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 LINC00315P59091 139 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 UBE2MP61081 183 aaKnown RBP10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 RRAS2P62070 204 aaPredicted RBP10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 KIR3DS1Q14943 382 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 PYDC2Q56P42 97 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 PATE2Q6UY27 113 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 LINC00305Q7Z4B0 112 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 ZNF546Q86UE3 836 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 BPIFA4PQ86YQ2 179 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 SMIM8Q96KF7 97 aa10.65□□□□□ -0.7
SUPT16H-205ENST00000556217 LEPP41159 167 aa10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 DAZ2Q13117 558 aaKnown RBP10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 OR10P1Q8NGE3 313 aa10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 TRIM63Q969Q1 353 aa10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 PYGO2Q9BRQ0 406 aa10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 PARD6GQ9BYG4 376 aaPredicted RBP10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 SLIRPQ9GZT3 109 aaKnown RBP10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 TMPRSS5Q9H3S3 457 aa10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 PXMP4Q9Y6I8 212 aa10.64□□□□□ -0.71
SUPT16H-205ENST00000556217 NOL3O60936 208 aaKnown RBP10.63□□□□□ -0.71
SUPT16H-205ENST00000556217 METTL15P1P0C7V9 234 aa10.63□□□□□ -0.71
SUPT16H-205ENST00000556217 ERVFC1-1P60608 527 aa10.63□□□□□ -0.71
SUPT16H-205ENST00000556217 SLC38A11Q08AI6 406 aa10.63□□□□□ -0.71
SUPT16H-205ENST00000556217 CDPF1Q6NVV7 123 aa10.63□□□□□ -0.71
SUPT16H-205ENST00000556217 ODF3Q96PU9 254 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms