RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 CORTO00230 105 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 ATP5LO75964 103 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 IGKV1-39P01597 117 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 IGKV3-20P01619 116 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 IGKV1D-39P04432 117 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 FABP1P07148 127 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 HOXA1P49639 335 aaPredicted RBP4.13□□□□□ -1.75
PRKCH-220ENST00000556164 SUB1P53999 127 aaKnown RBP eCLIP4.13□□□□□ -1.75
PRKCH-220ENST00000556164 FXYD7P58549 80 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 TAS2R46P59540 309 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 IZUMO4Q1ZYL8 232 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 TIGITQ495A1 244 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 FAM222AQ5U5X8 452 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 Q8N1X5 172 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 Q8N3U1 123 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 OR4D10Q8NGI6 311 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 PDCD10Q9BUL8 212 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 RNF167Q9H6Y7 350 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 MRPL36Q9P0J6 103 aaKnown RBP4.13□□□□□ -1.75
PRKCH-220ENST00000556164 RFNGQ9Y644 331 aa4.13□□□□□ -1.75
PRKCH-220ENST00000556164 SMIM9A6NGZ8 99 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 ZNF705FA8MVS1 300 aaPredicted RBP4.12□□□□□ -1.75
PRKCH-220ENST00000556164 H3BMM0 161 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 TSPAN13O95857 204 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 IGKV1-17P01599 117 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 ZNF705DP0CH99 300 aaPredicted RBP4.12□□□□□ -1.75
PRKCH-220ENST00000556164 ZNF705BP0CI00 300 aaPredicted RBP4.12□□□□□ -1.75
PRKCH-220ENST00000556164 RNASE2P10153 161 aaKnown RBP4.12□□□□□ -1.75
PRKCH-220ENST00000556164 HLA-DRB4P13762 266 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 HLA-DMAP28067 261 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 HRH1P35367 487 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 AKR1C2P52895 323 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 AP2S1P53680 142 aaPredicted RBP4.12□□□□□ -1.75
PRKCH-220ENST00000556164 UBE2G2P60604 165 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 SPCS3P61009 180 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 LPCAT3Q6P1A2 487 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 ZNF705AQ6ZN79 300 aaPredicted RBP4.12□□□□□ -1.75
PRKCH-220ENST00000556164 SYT8Q8NBV8 401 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 OR4X1Q8NH49 305 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 OR51M1Q9H341 326 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 ENY2Q9NPA8 101 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 SCRT2Q9NQ03 307 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 ANAPC10Q9UM13 185 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 HLA-DRB4X5D2U9 266 aa4.12□□□□□ -1.75
PRKCH-220ENST00000556164 TRAV30A0A087WSZ9 112 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 RPS10-NUDT3A0A1W2PQS6 291 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 INS-IGF2F8WCM5 200 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 IGKV1-5P01602 117 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 IL4P05112 153 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 ETV6P41212 452 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 TAS2R20P59543 309 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 AP3S2P59780 193 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 DEFB1P60022 68 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 GABARAPL2P60520 117 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 DAD1P61803 113 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 LAGE3Q14657 143 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 UBE2NLQ5JXB2 153 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 TMEM69Q5SWH9 247 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 GDF5OSQ5U4N7 250 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 IZUMO2Q6UXV1 221 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 CLVS1Q8IUQ0 354 aaPredicted RBP4.11□□□□□ -1.75
PRKCH-220ENST00000556164 C6orf223Q8N319 242 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 C15orf53Q8NAA6 179 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 OR1S2Q8NGQ3 325 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 DTD1Q8TEA8 209 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 Q8WTZ3 238 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 S100A16Q96FQ6 103 aaKnown RBP4.11□□□□□ -1.75
PRKCH-220ENST00000556164 ATP5SQ99766 215 aa4.11□□□□□ -1.75
PRKCH-220ENST00000556164 C7orf50Q9BRJ6 194 aaKnown RBP4.11□□□□□ -1.75
PRKCH-220ENST00000556164 YTHDF1Q9BYJ9 559 aaKnown RBP4.11□□□□□ -1.75
PRKCH-220ENST00000556164 YTHDF2Q9Y5A9 579 aaKnown RBP4.11□□□□□ -1.75
PRKCH-220ENST00000556164 IGLV5-52A0A0A0MRZ9 124 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 IGLV9-49A0A0B4J1Y8 123 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 TRBV7-9A0A0J9YWB2 115 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 NBDYA0A0U1RRE5 68 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 ANKRD65E5RJM6 399 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 GSTZ1O43708 216 aaPredicted RBP4.1□□□□□ -1.75
PRKCH-220ENST00000556164 HBE1P02100 147 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 IGLC1P0CG04 106 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 PGAM2P15259 253 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 OR10J1P30954 320 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 PRSS3P35030 304 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 RPL5P46777 297 aaKnown RBP4.1□□□□□ -1.75
PRKCH-220ENST00000556164 RND2P52198 227 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 DHODHQ02127 395 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 OXA1LQ15070 435 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 TRIM16LQ309B1 348 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 GSG1LQ6UXU4 331 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 SPATA12Q7Z6I5 190 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 LINC01561Q8N1V8 128 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 SAMD12Q8N8I0 201 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 OR4B1Q8NGF8 309 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 RNASE11Q8TAA1 199 aaKnown RBP4.1□□□□□ -1.75
PRKCH-220ENST00000556164 ISOC2Q96AB3 205 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 LINC00052Q96N35 136 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 SRRQ9GZT4 340 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 SLC35B3Q9H1N7 401 aa4.1□□□□□ -1.75
PRKCH-220ENST00000556164 VCX3AQ9NNX9 186 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms