RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 H3BQ15 152 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 SNRPCP09234 159 aaKnown RBP8.34□□□□□ -1.07
TMEM260-208ENST00000555905 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
TMEM260-208ENST00000555905 PAFAH1B2P68402 229 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 PMS2P11Q13670 270 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 PDE6HQ13956 83 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 DEFB114Q30KQ6 69 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 SAMD13Q5VXD3 122 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 RBPMS2Q6ZRY4 209 aaKnown RBP8.34□□□□□ -1.07
TMEM260-208ENST00000555905 SUN5Q8TC36 379 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 MCRIP2Q9BUT9 160 aaKnown RBP8.34□□□□□ -1.07
TMEM260-208ENST00000555905 NRN1Q9NPD7 142 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 ZNF586Q9NXT0 402 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 SELENOKQ9Y6D0 94 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 SMAD5-AS1Q9Y6J3 95 aa8.34□□□□□ -1.07
TMEM260-208ENST00000555905 STAB1Q9NY15 2570 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 IGKV3-7A0A075B6H7 116 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 H3BTX0 84 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
TMEM260-208ENST00000555905 PAGE4O60829 102 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 ZNF253O75346 499 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 INSL3P51460 131 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 UBE2G2P60604 165 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 PSG9Q00887 426 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 CST9LP1Q5W188 147 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 FAM90A2PQ658T7 463 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 ARL2-SNX15V9GYD0 113 aa8.33□□□□□ -1.08
TMEM260-208ENST00000555905 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 A0A1W2PRE2 83 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 RBFOX3A6NFN3 312 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 FAM74A7A6NL05 159 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 BCL2P10415 239 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 RANP62826 216 aaKnown RBP8.32□□□□□ -1.08
TMEM260-208ENST00000555905 HAGHQ16775 308 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 CD300EQ496F6 205 aaPredicted RBP8.32□□□□□ -1.08
TMEM260-208ENST00000555905 C9orf66Q5T8R8 295 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 LYPD1Q8N2G4 141 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 GBGT1Q8N5D6 347 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 WFDC9Q8NEX5 89 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 OR2K2Q8NGT1 345 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 C17orf77Q96MU5 243 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 FAM210AQ96ND0 272 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 NKX6-2Q9C056 277 aaPredicted RBP8.32□□□□□ -1.08
TMEM260-208ENST00000555905 EIF5A2Q9GZV4 153 aaKnown RBP8.32□□□□□ -1.08
TMEM260-208ENST00000555905 MS4A6AQ9H2W1 248 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 AAMDCQ9H7C9 122 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
TMEM260-208ENST00000555905 LINC00862A6NCI5 91 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 TSPAN4O14817 238 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 NDUFB4O95168 129 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 ID1P41134 155 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 TOR2AQ5JU69 321 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 LCN12Q6JVE5 192 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 WFDC3Q8IUB2 231 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 TMEM61Q8N0U2 210 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 TXNDC17Q9BRA2 123 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 Q9H3A6 140 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 OTORQ9NRC9 128 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 MED9Q9NWA0 146 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 CLEC5AQ9NY25 188 aa8.31□□□□□ -1.08
TMEM260-208ENST00000555905 YTHDF2Q9Y5A9 579 aaKnown RBP8.31□□□□□ -1.08
TMEM260-208ENST00000555905 TRAV2A0A0B4J234 112 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 LOC102723971A0A1B0GUV8 181 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 RAB19A4D1S5 217 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 SLC17A3O00476 420 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 ISLRO14498 428 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 IGLV1-51P01701 117 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 TFPI2P48307 235 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 SUMO1P63165 101 aaKnown RBP8.3□□□□□ -1.08
TMEM260-208ENST00000555905 MEF2BQ02080 365 aaPredicted RBP8.3□□□□□ -1.08
TMEM260-208ENST00000555905 ICAM4Q14773 271 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 PEA15Q15121 130 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 GUCA2BQ16661 112 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 KRTAP21-3Q3LHN1 58 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 ZNF506Q5JVG8 444 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 COMMD7Q86VX2 200 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 CMTM2Q8TAZ6 248 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 DCANP1Q8TF63 244 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 SPAG8Q99932 426 aaPredicted RBP8.3□□□□□ -1.08
TMEM260-208ENST00000555905 RARRES2Q99969 163 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 GPR61Q9BZJ8 451 aa8.3□□□□□ -1.08
TMEM260-208ENST00000555905 ZNF331Q9NQX6 463 aaPredicted RBP8.3□□□□□ -1.08
TMEM260-208ENST00000555905 PGPA6NDG6 321 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 OR4C46A6NHA9 309 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 SLC25A5P05141 298 aaKnown RBP8.29□□□□□ -1.08
TMEM260-208ENST00000555905 CSN1S1P47710 185 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 SNRPD3P62318 126 aaKnown RBP8.29□□□□□ -1.08
TMEM260-208ENST00000555905 NDUFA5Q16718 116 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 PRR31Q5SQ13 230 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 EXOC3-AS1Q8N2X6 119 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 SPATA3Q8NHX4 192 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 RXFP4Q8TDU9 374 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 SMDT1Q9H4I9 107 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 PRELID1Q9Y255 219 aa8.29□□□□□ -1.08
TMEM260-208ENST00000555905 VWFP04275 2813 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms