RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PQLC2Q6ZP29 291 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 MAP6D1Q9H9H5 199 aa9.43□□□□□ -0.9
SYNE2-219ENST00000555323 TRAV8-2A0A0B4J237 113 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 OR11H12B2RN74 326 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-219ENST00000555323 NBEAP1P0C6P0 100 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 PYYP10082 97 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 RAB5CP51148 216 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 SNRPD3P62318 126 aaKnown RBP9.42□□□□□ -0.9
SYNE2-219ENST00000555323 DEFA6Q01524 100 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 ZNF726P1Q15940 193 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 LCN15Q6UWW0 184 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 SUN5Q8TC36 379 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 RNF141Q8WVD5 230 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 TMED6Q8WW62 240 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 FXYD5Q96DB9 178 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 SLC50A1Q9BRV3 221 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 PAXXQ9BUH6 204 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 ZNF331Q9NQX6 463 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-219ENST00000555323 CLEC5AQ9NY25 188 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 NOTCH1P46531 2555 aa9.42□□□□□ -0.9
SYNE2-219ENST00000555323 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
SYNE2-219ENST00000555323 CTXND1A0A1B0GTU2 59 aa9.41□□□□□ -0.9
SYNE2-219ENST00000555323 ZNF688P0C7X2 276 aa9.41□□□□□ -0.9
SYNE2-219ENST00000555323 DEFB131AP59861 70 aa9.41□□□□□ -0.9
SYNE2-219ENST00000555323 LINC00322Q6ZN03 302 aaPredicted RBP9.41□□□□□ -0.9
SYNE2-219ENST00000555323 PHYHIPLQ96FC7 376 aa9.41□□□□□ -0.9
SYNE2-219ENST00000555323 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
SYNE2-219ENST00000555323 UBQLN2Q9UHD9 624 aa9.41□□□□□ -0.9
SYNE2-219ENST00000555323 BOLA2-SMG1P6H3BVE0 249 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 OR7C2O60412 319 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 NDUFB4O95168 129 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 CXorf1O96002 111 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 SULT1A2P50226 295 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 SSX7Q7RTT5 188 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 LYPD1Q8N2G4 141 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 DEFB125Q8N687 156 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 CITED4Q96RK1 184 aa9.4□□□□□ -0.9
SYNE2-219ENST00000555323 SLC17A3O00476 420 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 HMGB3O15347 200 aaKnown RBP9.39□□□□□ -0.91
SYNE2-219ENST00000555323 EIF3GO75821 320 aaKnown RBP eCLIP9.39□□□□□ -0.91
SYNE2-219ENST00000555323 SNRPCP09234 159 aaKnown RBP9.39□□□□□ -0.91
SYNE2-219ENST00000555323 OR10J4P0C629 311 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 ARL14EPLP0DKL9 152 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 FHITP49789 147 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 PSG9Q00887 426 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 PSG3Q16557 428 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 APRG1Q8IVJ8 170 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 LRRC20Q8TCA0 184 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 WFDC10AQ9H1F0 79 aa9.39□□□□□ -0.91
SYNE2-219ENST00000555323 H3BTX0 84 aa9.38□□□□□ -0.91
SYNE2-219ENST00000555323 GCHFRP30047 84 aa9.38□□□□□ -0.91
SYNE2-219ENST00000555323 UBE2L3P68036 154 aaKnown RBP9.38□□□□□ -0.91
SYNE2-219ENST00000555323 ZNF124Q15973 351 aa9.38□□□□□ -0.91
SYNE2-219ENST00000555323 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
SYNE2-219ENST00000555323 LINC00052Q96N35 136 aa9.38□□□□□ -0.91
SYNE2-219ENST00000555323 TMEM167BQ9NRX6 74 aa9.38□□□□□ -0.91
SYNE2-219ENST00000555323 TRAV1-1A0A0B4J248 108 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 RBMY1BA6NDE4 496 aaKnown RBP9.37□□□□□ -0.91
SYNE2-219ENST00000555323 RBMY1EA6NEQ0 496 aaKnown RBP9.37□□□□□ -0.91
SYNE2-219ENST00000555323 RBMY1DP0C7P1 496 aaKnown RBP9.37□□□□□ -0.91
SYNE2-219ENST00000555323 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 FOXI2Q6ZQN5 318 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 MRAPQ8TCY5 172 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 CLUHP3Q96NS8 147 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 SAV1Q9H4B6 383 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-219ENST00000555323 TUBA4BQ9H853 241 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 SRD5A3Q9H8P0 318 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 PRELID1Q9Y255 219 aa9.37□□□□□ -0.91
SYNE2-219ENST00000555323 MAP1LC3B2A6NCE7 125 aa9.36□□□□□ -0.91
SYNE2-219ENST00000555323 H2AFB1P0C5Y9 115 aa9.36□□□□□ -0.91
SYNE2-219ENST00000555323 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
SYNE2-219ENST00000555323 RANP62826 216 aaKnown RBP9.36□□□□□ -0.91
SYNE2-219ENST00000555323 RNF182Q8N6D2 247 aa9.36□□□□□ -0.91
SYNE2-219ENST00000555323 ARL6IP6Q8N6S5 226 aa9.36□□□□□ -0.91
SYNE2-219ENST00000555323 FAM213BQ8TBF2 198 aa9.36□□□□□ -0.91
SYNE2-219ENST00000555323 SFT2D1Q8WV19 159 aa9.36□□□□□ -0.91
SYNE2-219ENST00000555323 MAP1LC3BQ9GZQ8 125 aa9.36□□□□□ -0.91
SYNE2-219ENST00000555323 LOC102724200A0A096LPH7 203 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-219ENST00000555323 A0A0J9YX75 114 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 A8MTW9 85 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 H3BMM0 161 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 FRMD6-AS1P0C7T7 363 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 HLA-DRB4P13762 266 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 ALKAL2Q6UX46 152 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 TRPT1Q86TN4 253 aaKnown RBP9.35□□□□□ -0.91
SYNE2-219ENST00000555323 EXOC3-AS1Q8N2X6 119 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 RPUSD4Q96CM3 377 aaKnown RBP9.35□□□□□ -0.91
SYNE2-219ENST00000555323 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 HLA-DRB4X5D2U9 266 aa9.35□□□□□ -0.91
SYNE2-219ENST00000555323 KIR2DL5BA0A0G2JN68 375 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 KIR2DL5BA0A0G2JPC4 375 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms