RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 TNXBP22105 4242 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 CD3DP04234 171 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 CRYGDP07320 174 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 S100A7P31151 101 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 TGFBR1P36897 503 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 MRPL23Q16540 153 aaKnown RBP6.44□□□□□ -1.38
SCFD1-215ENST00000555259 GPR107Q5VW38 600 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 TMEM182Q6ZP80 229 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-215ENST00000555259 NEGR1Q7Z3B1 354 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 MARCH1Q8TCQ1 289 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 RBKSQ9H477 322 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 NAA60Q9H7X0 242 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 GSN-AS1Q9NRJ2 163 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 FUT9Q9Y231 359 aa6.44□□□□□ -1.38
SCFD1-215ENST00000555259 TRGV1A0A0A0MS02 117 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 SMIM31A0A1B0GVY4 71 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-215ENST00000555259 H3BRN7 92 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 TNFAIP8O95379 198 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 RPL7P18124 248 aaKnown RBP6.43□□□□□ -1.38
SCFD1-215ENST00000555259 RPS19P39019 145 aaKnown RBP6.43□□□□□ -1.38
SCFD1-215ENST00000555259 SCGB2B2Q4G0G5 96 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 CCDC190Q86UF4 302 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 C10orf126Q8N4M7 172 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 C11orf72Q8NBR9 251 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 BPIFCQ8NFQ6 507 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 OR4D10Q8NGI6 311 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 PYGO2Q9BRQ0 406 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
SCFD1-215ENST00000555259 A0A087X0K7 114 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 TRAV12-3A0A0B4J271 114 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 PRAF2O60831 178 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 CRYBA4P53673 196 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 SCXQ7RTU7 201 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 OR1S1Q8NH92 325 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 LRRC20Q8TCA0 184 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 ST6GAL2Q96JF0 529 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 RTBDNQ9BSG5 229 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-215ENST00000555259 SHANK2-AS3Q9BTD1 123 aa6.42□□□□□ -1.38
SCFD1-215ENST00000555259 J3KRW8 73 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 IGHV3-53P01767 116 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 APOA1P02647 267 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 TBPP20226 339 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 CCR6P51684 374 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 SLAQ13239 276 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 SMCO1Q147U7 214 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 STEAP1BQ6NZ63 245 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 LRTM2Q8N967 370 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 ZNF680Q8NEM1 530 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 HHLA3Q9XRX5 114 aa6.41□□□□□ -1.38
SCFD1-215ENST00000555259 C14orf166Q9Y224 244 aaKnown RBP6.41□□□□□ -1.38
SCFD1-215ENST00000555259 CRYM-AS1A6NIL9 109 aa6.4□□□□□ -1.38
SCFD1-215ENST00000555259 SPINK4O60575 86 aa6.4□□□□□ -1.38
SCFD1-215ENST00000555259 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-215ENST00000555259 RAB11AP62491 216 aa6.4□□□□□ -1.38
SCFD1-215ENST00000555259 IZUMO2Q6UXV1 221 aa6.4□□□□□ -1.38
SCFD1-215ENST00000555259 ZNF431Q8TF32 576 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-215ENST00000555259 C8orf49Q96NF6 230 aa6.4□□□□□ -1.38
SCFD1-215ENST00000555259 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
SCFD1-215ENST00000555259 PRR13Q9NZ81 148 aa6.4□□□□□ -1.38
SCFD1-215ENST00000555259 COMMD3Q9UBI1 195 aa6.4□□□□□ -1.38
SCFD1-215ENST00000555259 PAIP2BQ9ULR5 123 aaKnown RBP6.4□□□□□ -1.38
SCFD1-215ENST00000555259 RCL1Q9Y2P8 373 aaKnown RBP6.4□□□□□ -1.38
SCFD1-215ENST00000555259 TRAV5A0A0B4J249 113 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 LINC00854A0A1B0GVQ3 168 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 PRAC2D3DTV9 90 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 K7EQD1 137 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 SRIP30626 198 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 RAP2BP61225 183 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 FHL2Q14192 279 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 OR52I2Q8NH67 350 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 ZNF331Q9NQX6 463 aaPredicted RBP6.4□□□□□ -1.39
SCFD1-215ENST00000555259 HIGD1AQ9Y241 93 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 KLF12Q9Y4X4 402 aa6.4□□□□□ -1.39
SCFD1-215ENST00000555259 PMS2P5A8MQ11 134 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 PRSS46E5RG02 174 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 E5RGE8 158 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 MRPS12O15235 138 aaKnown RBP6.39□□□□□ -1.39
SCFD1-215ENST00000555259 RS1O15537 224 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 LEPP41159 167 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 WFDC2Q14508 124 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 TEPPQ6URK8 271 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 VGLL1Q99990 258 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 Q9HAA7 133 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 MTFP1Q9UDX5 166 aa6.39□□□□□ -1.39
SCFD1-215ENST00000555259 A0A0B4J2A0 478 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 HYPMO75409 117 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 RAB3DO95716 219 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 CT45A10P0DMU9 189 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 IAPPP10997 89 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 AKR1C4P17516 323 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 CXCL2P19875 107 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 TCL1AP56279 114 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 AKR1C1Q04828 323 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 ZNF415Q09FC8 603 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 SURF2Q15527 256 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-215ENST00000555259 FAAP20Q6NZ36 180 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 LCN15Q6UWW0 184 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms