RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ATP6V1G1O75348 118 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 CD5P06127 495 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 HIST1H1EP10412 219 aaKnown RBP8.13□□□□□ -1.11
TDP1-211ENST00000555178 RPL7P18124 248 aaKnown RBP8.13□□□□□ -1.11
TDP1-211ENST00000555178 RIPPLY3P57055 190 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 SHISA2Q6UWI4 295 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 STXBP6Q8NFX7 210 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 OR4F17Q8NGA8 305 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 OR4F4Q96R69 305 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 TREM1Q9NP99 234 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 MANBALQ9NQG1 85 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 NOTCH1P46531 2555 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 NBEAL1Q6ZS30 2694 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 RAB19A4D1S5 217 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 C11orf94C9JXX5 98 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 OVOL1O14753 267 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 PF4P02776 101 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 PPT1P50897 306 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 CEBPGP53567 150 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 RPL11P62913 178 aaKnown RBP8.12□□□□□ -1.11
TDP1-211ENST00000555178 MEF2BQ02080 365 aaPredicted RBP8.12□□□□□ -1.11
TDP1-211ENST00000555178 NDUFA5Q16718 116 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 NARS2Q96I59 477 aaKnown RBP8.12□□□□□ -1.11
TDP1-211ENST00000555178 AGRNO00468 2067 aa8.12□□□□□ -1.11
TDP1-211ENST00000555178 IFNA1P01562 189 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 ATF4P18848 351 aaPredicted RBP8.11□□□□□ -1.11
TDP1-211ENST00000555178 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
TDP1-211ENST00000555178 GNG5P63218 68 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 C1orf194Q5T5A4 169 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 S100A7AQ86SG5 101 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 GBGT1Q8N5D6 347 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 CYB561D1Q8N8Q1 229 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 Q9H3A6 140 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 VAX2Q9UIW0 290 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 SCO2A0A1W2PP80 73 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 ZNF785A8K8V0 405 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 M0R3E3 92 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 ADCYAP1P18509 176 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 GALR1P47211 349 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 PMS2P11Q13670 270 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 TCF24Q7RTU0 167 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 EIF4E3Q8N5X7 224 aaKnown RBP8.11□□□□□ -1.11
TDP1-211ENST00000555178 RNF182Q8N6D2 247 aa8.11□□□□□ -1.11
TDP1-211ENST00000555178 A0A1W2PS18 150 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 SRP19P09132 144 aaKnown RBP8.1□□□□□ -1.11
TDP1-211ENST00000555178 TFPI2P48307 235 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 CCDC28AQ8IWP9 274 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 GRAMD2BQ96HH9 432 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 LINC00052Q96N35 136 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 DERL1Q9BUN8 251 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 PEMTQ9UBM1 199 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 RPH3ALQ9UNE2 315 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 MGAM2Q2M2H8 2515 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 TRAV8-2A0A0B4J237 113 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 SFTA3P0C7M3 94 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 IGLL1P15814 213 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 FAM90A2PQ658T7 463 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 WFDC3Q8IUB2 231 aa8.1□□□□□ -1.11
TDP1-211ENST00000555178 A0A087X0K7 114 aa8.09□□□□□ -1.11
TDP1-211ENST00000555178 PGPA6NDG6 321 aa8.09□□□□□ -1.11
TDP1-211ENST00000555178 DEFB1P60022 68 aa8.09□□□□□ -1.11
TDP1-211ENST00000555178 PEA15Q15121 130 aa8.09□□□□□ -1.11
TDP1-211ENST00000555178 FAM24BQ8N5W8 94 aa8.09□□□□□ -1.11
TDP1-211ENST00000555178 LINC00479Q96M42 142 aa8.09□□□□□ -1.11
TDP1-211ENST00000555178 ZNF705FA8MVS1 300 aaPredicted RBP8.09□□□□□ -1.12
TDP1-211ENST00000555178 SOCS3O14543 225 aa8.09□□□□□ -1.12
TDP1-211ENST00000555178 S100A7P31151 101 aa8.09□□□□□ -1.12
TDP1-211ENST00000555178 TMEM61Q8N0U2 210 aa8.09□□□□□ -1.12
TDP1-211ENST00000555178 C20orf173Q96LM9 149 aa8.09□□□□□ -1.12
TDP1-211ENST00000555178 SGK494Q96LW2 274 aa8.09□□□□□ -1.12
TDP1-211ENST00000555178 GPR82Q96P67 336 aa8.09□□□□□ -1.12
TDP1-211ENST00000555178 ZNF331Q9NQX6 463 aaPredicted RBP8.09□□□□□ -1.12
TDP1-211ENST00000555178 DNAH3Q8TD57 4116 aa8.08□□□□□ -1.12
TDP1-211ENST00000555178 TMEM218A2RU14 115 aa8.08□□□□□ -1.12
TDP1-211ENST00000555178 SAP30O75446 220 aa8.08□□□□□ -1.12
TDP1-211ENST00000555178 SLC25A5P05141 298 aaKnown RBP8.08□□□□□ -1.12
TDP1-211ENST00000555178 DEFB114Q30KQ6 69 aa8.08□□□□□ -1.12
TDP1-211ENST00000555178 CD300EQ496F6 205 aaPredicted RBP8.08□□□□□ -1.12
TDP1-211ENST00000555178 UQCC3Q6UW78 93 aa8.08□□□□□ -1.12
TDP1-211ENST00000555178 RPUSD4Q96CM3 377 aaKnown RBP8.08□□□□□ -1.12
TDP1-211ENST00000555178 ASCL2Q99929 193 aa8.08□□□□□ -1.12
TDP1-211ENST00000555178 MS4A6AQ9H2W1 248 aa8.08□□□□□ -1.12
TDP1-211ENST00000555178 NRN1Q9NPD7 142 aa8.08□□□□□ -1.12
TDP1-211ENST00000555178 PDE6HQ13956 83 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 WFDC9Q8NEX5 89 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 DYNLRB2Q8TF09 96 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 DCANP1Q8TF63 244 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 SLC35B3Q9H1N7 401 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 OTORQ9NRC9 128 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 RNF24Q9Y225 148 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 ARL2-SNX15V9GYD0 113 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 TRAV34A0A0B4J273 112 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 HELTA6NFD8 242 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 M0QZ24 198 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 ZNF674Q2M3X9 581 aa8.07□□□□□ -1.12
TDP1-211ENST00000555178 C16orf92Q96LL3 132 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms