RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ALKBH7Q9BT30 221 aaPredicted RBP6.9□□□□□ -1.31
TDP1-210ENST00000554976 TGIF2-C20orf24A0A0A6YYL0 155 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 FAM223BA6NKX1 122 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 CRYBB3P26998 211 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 BLCAPP62952 87 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 LY6EQ16553 131 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 FAM223AQ8IWN6 122 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 WFDC11Q8NEX6 87 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 KLF12Q9Y4X4 402 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 OR2T8A6NH00 312 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 GNG7O60262 68 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 IGHV4-59P01825 116 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 OCC1Q8TAD7 63 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 TMUB1Q9BVT8 246 aa6.89□□□□□ -1.31
TDP1-210ENST00000554976 USP9YO00507 2555 aaPredicted RBP6.89□□□□□ -1.31
TDP1-210ENST00000554976 TRBV7-1A0A0A6YYK4 115 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 CBY3A6NI87 242 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 IL4P05112 153 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 ADIRFQ15847 76 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 ZNF705AQ6ZN79 300 aaPredicted RBP6.88□□□□□ -1.31
TDP1-210ENST00000554976 OR2D3Q8NGH3 330 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 C20orf144Q9BQM9 153 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 SMAD5-AS1Q9Y6J3 95 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 NBEAP1P0C6P0 100 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 Q56UQ5 140 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 CLUHP3Q96NS8 147 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 MIEN1Q9BRT3 115 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 U3KQE9 123 aa6.88□□□□□ -1.31
TDP1-210ENST00000554976 TRBV19A0A075B6N1 114 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 TRBV24-1A0A075B6N3 115 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 IGLV2-11P01706 119 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
TDP1-210ENST00000554976 UBE2V1Q13404 147 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 SIGLEC15Q6ZMC9 328 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 FOXC2Q99958 501 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 CDC42EP3Q9UKI2 254 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 TRBV6-1A0A0K0K1D8 114 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 CLDN34H7C241 214 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 HIST1H1EP10412 219 aaKnown RBP6.87□□□□□ -1.31
TDP1-210ENST00000554976 TMEM190Q8WZ59 177 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 TMEM18Q96B42 140 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 IMMP2LQ96T52 175 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 VPS25Q9BRG1 176 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 AKAP6Q13023 2319 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 WNK2Q9Y3S1 2297 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.87□□□□□ -1.31
TDP1-210ENST00000554976 SLC17A3O00476 420 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 PEX7O00628 323 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 TMEM183BQ1AE95 376 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 CENPWQ5EE01 88 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 Q8N2B8 174 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 EEF1AKMT3Q96AZ1 226 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 Q9H3A6 140 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 EPDR1Q9UM22 224 aa6.87□□□□□ -1.31
TDP1-210ENST00000554976 GPR183P32249 361 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 RANP62826 216 aaKnown RBP6.86□□□□□ -1.31
TDP1-210ENST00000554976 TOMM20LQ6UXN7 152 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 GBGT1Q8N5D6 347 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 MYOZ3Q8TDC0 251 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 SFRP2Q96HF1 295 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 MLST8Q9BVC4 326 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 ZNF702PQ9H963 129 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 LINC00527Q9UJ94 153 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 VPREB3Q9UKI3 123 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 V9GYV3 84 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 A0A087X0K7 114 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 HELTA6NFD8 242 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 IGHG4P01861 327 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 CLEC3BP05452 202 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 PSMB8P28062 276 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 RPS20P60866 119 aaKnown RBP6.86□□□□□ -1.31
TDP1-210ENST00000554976 GNG5P63218 68 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 RPL19P84098 196 aaKnown RBP6.86□□□□□ -1.31
TDP1-210ENST00000554976 LINC00479Q96M42 142 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 OTORQ9NRC9 128 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 URGCP-MRPS24S4R325 110 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 LRRK2Q5S007 2527 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 CENPEQ02224 2701 aa6.86□□□□□ -1.31
TDP1-210ENST00000554976 SRP14P37108 136 aaKnown RBP6.85□□□□□ -1.31
TDP1-210ENST00000554976 LYPD1Q8N2G4 141 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 SMIM12Q96EX1 92 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 MS4A10Q96PG2 267 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 ZNF320A2RRD8 509 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 ZNF785A8K8V0 405 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 LTAP01374 205 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 TYMSP04818 313 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 ATP5G2Q06055 141 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 CLEC19AQ6UXS0 136 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 KLK15Q9H2R5 256 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 ZANQ9Y493 2812 aa6.85□□□□□ -1.31
TDP1-210ENST00000554976 TMEM89A2RUT3 159 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 ISLRO14498 428 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 BUB3O43684 328 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 TRBV12-3P01733 135 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 TCRAP04437 139 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 PDE6HQ13956 83 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 Q71RC1 249 aaPredicted RBP6.84□□□□□ -1.31
TDP1-210ENST00000554976 BPIFA4PQ86YQ2 179 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms