RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 HIST2H3AQ71DI3 136 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 SSX7Q7RTT5 188 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 FAM58AQ8N1B3 248 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 FAM24BQ8N5W8 94 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 Q8N6K4 173 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF565Q8N9K5 539 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF680Q8NEM1 530 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 OR13C9Q8NGT0 318 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 DEFB104AQ8WTQ1 72 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 TMEM106AQ96A25 262 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 CENPNQ96H22 339 aaPredicted RBP0.78□□□□□ -2.28
PRPF39-208ENST00000554785 PDCD1LG2Q9BQ51 273 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 PBOV1Q9GZY1 135 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 HES4Q9HCC6 221 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 OR2S2Q9NQN1 319 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IDI2-AS1Q9NZ38 188 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 RABAC1Q9UI14 185 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF230Q9UIE0 474 aaPredicted RBP0.78□□□□□ -2.28
PRPF39-208ENST00000554785 ATPIF1Q9UII2 106 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 ENPP5Q9UJA9 477 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 TRAPPC2LQ9UL33 140 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 CHTOPQ9Y3Y2 248 aaKnown RBP0.78□□□□□ -2.28
PRPF39-208ENST00000554785 FAM240AA0A1B0GVK7 77 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 ANKRD20A5PA0PJZ0 165 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 PQLC2LA1A4F0 135 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 OR2T8A6NH00 312 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 F5H768 121 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 DEGS1O15121 323 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 POLR3GO15318 223 aaPredicted RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 GATCO43716 136 aaKnown RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 DHRS3O75911 302 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CYB5AP00167 134 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CST4P01036 141 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 TTRP02766 147 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 ISG15P05161 165 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 BPGMP07738 259 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CGB3P0DN86 165 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 HLA-GP17693 338 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 GPX2P18283 190 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 OMPP47874 163 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 RPS11P62280 158 aaKnown RBP eCLIP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CAV1Q03135 178 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 PRKCDQ05655 676 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM267Q0VDI3 215 aaPredicted RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 IL15RAQ13261 267 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CDNFQ49AH0 187 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 TTC32Q5I0X7 151 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM69Q5SWH9 247 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CLVS2Q5SYC1 327 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 SYT6Q5T7P8 510 aaPredicted RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 FAHD1Q6P587 224 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 PDPNQ86YL7 162 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 FUNDC1Q8IVP5 155 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 TCTEX1D1Q8N7M0 179 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 C1orf64Q8NEQ6 169 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 OR5A2Q8NGI9 324 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 OR51A4Q8NGJ6 313 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 OR8D4Q8NGM9 314 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 OR2T4Q8NH00 348 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 ZNRF2Q8NHG8 242 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 ORAOV1Q8WV07 137 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 MITD1Q8WV92 249 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 RNF133Q8WVZ7 376 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 SLC35B4Q969S0 331 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 YIPF6Q96EC8 236 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 MRPS24Q96EL2 167 aaKnown RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 GPER1Q99527 375 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 C20orf144Q9BQM9 153 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 SEC22CQ9BRL7 303 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 MROQ9BYG7 248 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 C11orf68Q9H3H3 251 aaKnown RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 FAM206AQ9NX38 181 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 ERGIC3Q9Y282 383 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 TP53TG1Q9Y2A0 90 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 LINC00588Q9Y4M8 146 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 ORC6Q9Y5N6 252 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 V9GYY5 206 aaPredicted RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 IGKV1-9A0A0C4DH69 117 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 LOC107986453A0A1B0GWG9 222 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 OOSP1A8MZH6 123 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 GEMIN2O14893 280 aaKnown RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 PSCAO43653 123 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 GADD45GO95257 159 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 HBZP02008 142 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CTSDP07339 412 aaPredicted RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 PFN1P07737 140 aaKnown RBP0.77□□□□□ -2.29
PRPF39-208ENST00000554785 SCTP09683 121 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 SEC11BP0C7V7 166 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 DEFA4P12838 97 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF3P17036 446 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 HLA-DMAP28067 261 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 HTR2CP28335 458 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CASQ1P31415 396 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 TGFBR1P36897 503 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 RBP2P50120 134 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 CCL18P55774 89 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 TCTAP57738 103 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 DAD1P61803 113 aa0.77□□□□□ -2.29
PRPF39-208ENST00000554785 ATP5G2Q06055 141 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms