RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 LDLRAD2Q5SZI1 272 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 AMMECR1LQ6DCA0 310 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 GTSF1Q8WW33 167 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 IGHV1-24A0A0C4DH33 117 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 NPIPB5A8MRT5 1133 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 VWC2LB2RUY7 222 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 HLA-DRB1P01911 266 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 RNASE8Q8TDE3 154 aaKnown RBP9.14□□□□□ -0.95
PTPN21-205ENST00000554270 HSPB8Q9UJY1 196 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 SIGLEC9Q9Y336 463 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 UFC1Q9Y3C8 167 aa9.14□□□□□ -0.95
PTPN21-205ENST00000554270 DSCAML1Q8TD84 2053 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 TMEM213A2RRL7 107 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 TMEM189A5PLL7 270 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 CKS2P33552 79 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 CR1LQ2VPA4 569 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 FAM169BQ8N8A8 192 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 SVIPQ8NHG7 77 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 CHODLQ9H9P2 273 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 POU2AF1Q16633 256 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 FAM162BQ5T6X4 162 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 SVEP1Q4LDE5 3571 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 CENPEQ02224 2701 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 IGKV1D-37A0A075B6S9 117 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 IGHV1-3A0A0C4DH29 117 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 C8orf46Q8TAG6 207 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 C8orf49Q96NF6 230 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 PSG8Q9UQ74 426 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 HIVEP3Q5T1R4 2406 aa9.13□□□□□ -0.95
PTPN21-205ENST00000554270 FCN3O75636 299 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 LIPFP07098 398 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 AMN1Q8IY45 258 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 SETD2Q9BYW2 2564 aaPredicted RBP9.12□□□□□ -0.95
PTPN21-205ENST00000554270 THYN1Q9P016 225 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 IGHV3OR16-10A0A075B7F0 116 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 IGLC7A0M8Q6 106 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 EVI2AP22794 236 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 IFI27P40305 119 aaPredicted RBP9.12□□□□□ -0.95
PTPN21-205ENST00000554270 TEX36Q5VZQ5 186 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 TLN2Q9Y4G6 2542 aa9.12□□□□□ -0.95
PTPN21-205ENST00000554270 D6R8Y8 96 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 ITGB1BP1O14713 200 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 APOBEC3AP31941 199 aaPredicted RBP9.11□□□□□ -0.95
PTPN21-205ENST00000554270 ATP5IP56385 69 aaPredicted RBP9.11□□□□□ -0.95
PTPN21-205ENST00000554270 CACNG7P62955 275 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 SPATA12Q7Z6I5 190 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 KLK15Q9H2R5 256 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 MRPL27Q9P0M9 148 aaKnown RBP9.11□□□□□ -0.95
PTPN21-205ENST00000554270 ASCL5Q7RTU5 278 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 RNF125Q96EQ8 232 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 RIPPLY3P57055 190 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 PRSS57Q6UWY2 283 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 COX11Q9Y6N1 276 aa9.11□□□□□ -0.95
PTPN21-205ENST00000554270 NDUFB8O95169 186 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 PAX1P15863 534 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 TMEM155Q4W5P6 130 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 Q86TA4 180 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 OR10AG1Q8NH19 301 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 PRELID3AQ96N28 172 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 NCOR1P1Q9H4R4 102 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 LINC00527Q9UJ94 153 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 ZFYVE26Q68DK2 2539 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 LYZL1Q6UWQ5 148 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 BCL6BQ8N143 479 aaPredicted RBP9.1□□□□□ -0.95
PTPN21-205ENST00000554270 Q8N976 141 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 NUP37Q8NFH4 326 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 OR4A5Q8NH83 315 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 TIMD4Q96H15 378 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 PTPN13Q12923 2485 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 FNDC10F2Z333 226 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 HLA-DMBP28068 263 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 IGFL3Q6UXB1 125 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 C2CD3Q4AC94 2353 aa9.1□□□□□ -0.95
PTPN21-205ENST00000554270 RAI1Q7Z5J4 1906 aaPredicted RBP9.09□□□□□ -0.95
PTPN21-205ENST00000554270 POLQO75417 2590 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 CEACAM4O75871 244 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 TOMM40O96008 361 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 ESDP10768 282 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 RPL24P83731 157 aaKnown RBP9.09□□□□□ -0.95
PTPN21-205ENST00000554270 UBE2V1Q13404 147 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 ZNF672Q499Z4 452 aaPredicted RBP9.09□□□□□ -0.95
PTPN21-205ENST00000554270 CLUHP3Q96NS8 147 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 OTORQ9NRC9 128 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 BUB1B-PAK6H3BSN5 160 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 IGLV2-23P01705 113 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 FAM106CPP0CH98 169 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 GCSHP23434 173 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 FAM106AQ4KMX7 169 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 TRGV9Q99603 122 aa9.09□□□□□ -0.95
PTPN21-205ENST00000554270 C7orf71A4D174 169 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 GAGE10A6NGK3 116 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 C12orf54Q6X4T0 127 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 H3BUT2 72 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 GPR183P32249 361 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 MBD6Q96DN6 1003 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 C2orf70A6NJV1 201 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 NDUFS7O75251 213 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 CTRLP40313 264 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms