RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TIMD4Q96H15 378 aa11.47□□□□□ -0.57
ACTN1-211ENST00000553882 TMEM208Q9BTX3 173 aa11.47□□□□□ -0.57
ACTN1-211ENST00000553882 TIMM8BQ9Y5J9 83 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-211ENST00000553882 LOC105371242A0A075B767 164 aa11.46□□□□□ -0.57
ACTN1-211ENST00000553882 NDPQ00604 133 aa11.46□□□□□ -0.57
ACTN1-211ENST00000553882 OR11H6Q8NGC7 330 aa11.46□□□□□ -0.57
ACTN1-211ENST00000553882 GFRA4Q9GZZ7 299 aa11.46□□□□□ -0.57
ACTN1-211ENST00000553882 SPTAN1Q13813 2472 aaKnown RBP11.46□□□□□ -0.57
ACTN1-211ENST00000553882 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.58
ACTN1-211ENST00000553882 J3KRW8 73 aa11.46□□□□□ -0.58
ACTN1-211ENST00000553882 CSN3P07498 182 aa11.46□□□□□ -0.58
ACTN1-211ENST00000553882 ARMS2P0C7Q2 107 aa11.46□□□□□ -0.58
ACTN1-211ENST00000553882 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.58
ACTN1-211ENST00000553882 DYNAPQ8N1N2 210 aa11.46□□□□□ -0.58
ACTN1-211ENST00000553882 MAP1AP78559 2803 aaPredicted RBP11.46□□□□□ -0.58
ACTN1-211ENST00000553882 LOC102724200A0A096LPH7 203 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-211ENST00000553882 HOXB4P17483 251 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-211ENST00000553882 CEACAM3P40198 252 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 ADORA2A-AS1P86434 159 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 C5orf64Q2M2E5 130 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 FBXL19-AS1Q494R0 122 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 TP73-AS1Q9UF72 201 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 PSG8Q9UQ74 426 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 SOX21Q9Y651 276 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-211ENST00000553882 HIVEP3Q5T1R4 2406 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 IGHV3OR16-8A0A075B7F1 116 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 APOHP02749 345 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-211ENST00000553882 FAM120AOSQ5T036 256 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
ACTN1-211ENST00000553882 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
ACTN1-211ENST00000553882 NDUFA3O95167 84 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 IGLL1P15814 213 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 KLHDC1Q8N7A1 406 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 ZNF414Q96IQ9 312 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 C8orf49Q96NF6 230 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 MCRIP2Q9BUT9 160 aaKnown RBP11.44□□□□□ -0.58
ACTN1-211ENST00000553882 RAXQ9Y2V3 346 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 IGHV3-35A0A0C4DH35 117 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 H0Y8G0 127 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 NPSP0C0P6 89 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 LINC00614P0C842 121 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 CRIP1P50238 77 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 STPG4Q8N801 248 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 NPBQ8NG41 125 aa11.44□□□□□ -0.58
ACTN1-211ENST00000553882 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 TMSB15BA0A087X1C1 80 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.43□□□□□ -0.58
ACTN1-211ENST00000553882 K7EQM0 130 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 MRPS12O15235 138 aaKnown RBP11.43□□□□□ -0.58
ACTN1-211ENST00000553882 PSG3Q16557 428 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 COL5A1-AS1Q5SY13 56 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 TMEM75Q8N9X5 138 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 ARPC1AQ92747 370 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 LAMTOR2Q9Y2Q5 125 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 A0A1B0GUT8 65 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 FAM231BA6NCW3 169 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 OR2T8A6NH00 312 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 ODF3BA8MYP8 253 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 OVOL3O00110 214 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 LEPROTL1O95214 131 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 PRTN3P24158 256 aa11.43□□□□□ -0.58
ACTN1-211ENST00000553882 IGLV11-55A0A075B6I3 123 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-211ENST00000553882 HAX1O00165 279 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 DLEU1O43261 78 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 NDUFS7O75251 213 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 TSPOP30536 169 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 VMO1Q7Z5L0 202 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 ZFP30Q9Y2G7 519 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 WI2-2373I1.2A0A1W2PRP0 233 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 HINT1P49773 126 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-211ENST00000553882 MFAP4P55083 255 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
ACTN1-211ENST00000553882 MUC21A0A0G2JKD1 596 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 MUC21A0A140T8X8 626 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 OR4C46A6NHA9 309 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 MUC21Q5SSG8 566 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 ZNF562Q6V9R5 426 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 NDFIP1Q9BT67 221 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 C21orf62Q9NYP8 219 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 RNF24Q9Y225 148 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 CHTOPQ9Y3Y2 248 aaKnown RBP11.41□□□□□ -0.58
ACTN1-211ENST00000553882 M0R1W7 72 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 NDUFB8O95169 186 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 CHCHD1Q96BP2 118 aaKnown RBP11.41□□□□□ -0.58
ACTN1-211ENST00000553882 AAMDCQ9H7C9 122 aa11.41□□□□□ -0.58
ACTN1-211ENST00000553882 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-211ENST00000553882 SYS1-DBNDD2H3BUS1 97 aa11.4□□□□□ -0.58
ACTN1-211ENST00000553882 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-211ENST00000553882 ZFP36P26651 326 aaKnown RBP11.4□□□□□ -0.58
ACTN1-211ENST00000553882 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
ACTN1-211ENST00000553882 hDV102S1A0JD36 115 aa11.4□□□□□ -0.58
ACTN1-211ENST00000553882 CT45A10P0DMU9 189 aa11.4□□□□□ -0.58
ACTN1-211ENST00000553882 FAM162BQ5T6X4 162 aa11.4□□□□□ -0.58
ACTN1-211ENST00000553882 C11orf71Q6IPW1 123 aa11.4□□□□□ -0.58
ACTN1-211ENST00000553882 LYPD1Q8N2G4 141 aa11.4□□□□□ -0.58
ACTN1-211ENST00000553882 TMUB1Q9BVT8 246 aa11.4□□□□□ -0.58
ACTN1-211ENST00000553882 C1RLQ9NZP8 487 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms