RNA–Protein interactions for RNA: ENST00000553674.1

UBR7-202, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 2

Gene UBR7, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-202ENST00000553674 STXBP6Q8NFX7 210 aa13.76□□□□□ -0.21
UBR7-202ENST00000553674 SFT2D1Q8WV19 159 aa13.76□□□□□ -0.21
UBR7-202ENST00000553674 TRBV19A0A075B6N1 114 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 TRAV8-2A0A0B4J237 113 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 TRAV1-1A0A0B4J248 108 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 SLC17A3O00476 420 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 CXorf1O96002 111 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 IFNA7P01567 189 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 NBEAP1P0C6P0 100 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 ATF4P18848 351 aaPredicted RBP13.75□□□□□ -0.21
UBR7-202ENST00000553674 TFPI2P48307 235 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 KRTAP10-11P60412 298 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 BEAN1Q3B7T3 259 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 WFDC3Q8IUB2 231 aa13.75□□□□□ -0.21
UBR7-202ENST00000553674 SPAG8Q99932 426 aaPredicted RBP13.75□□□□□ -0.21
UBR7-202ENST00000553674 TRAV2A0A0B4J234 112 aa13.74□□□□□ -0.21
UBR7-202ENST00000553674 UBE2L3P68036 154 aaKnown RBP13.74□□□□□ -0.21
UBR7-202ENST00000553674 GUCA2BQ16661 112 aa13.74□□□□□ -0.21
UBR7-202ENST00000553674 IGFL4Q6B9Z1 124 aa13.74□□□□□ -0.21
UBR7-202ENST00000553674 LCN12Q6JVE5 192 aa13.74□□□□□ -0.21
UBR7-202ENST00000553674 PCNPQ8WW12 178 aaKnown RBP13.74□□□□□ -0.21
UBR7-202ENST00000553674 GPR61Q9BZJ8 451 aa13.74□□□□□ -0.21
UBR7-202ENST00000553674 UBQLN2Q9UHD9 624 aa13.74□□□□□ -0.21
UBR7-202ENST00000553674 A0A1B0GV50 99 aa13.73□□□□□ -0.21
UBR7-202ENST00000553674 EGFEM1PQ0D2K5 195 aa13.73□□□□□ -0.21
UBR7-202ENST00000553674 GUK1Q16774 197 aa13.73□□□□□ -0.21
UBR7-202ENST00000553674 BLNKQ8WV28 456 aa13.73□□□□□ -0.21
UBR7-202ENST00000553674 MGAM2Q2M2H8 2515 aa13.73□□□□□ -0.21
UBR7-202ENST00000553674 DNAH3Q8TD57 4116 aa13.72□□□□□ -0.21
UBR7-202ENST00000553674 DNASE2O00115 360 aaPredicted RBP13.72□□□□□ -0.21
UBR7-202ENST00000553674 HLA-DMBP28068 263 aa13.72□□□□□ -0.21
UBR7-202ENST00000553674 PAFAH1B2P68402 229 aa13.72□□□□□ -0.21
UBR7-202ENST00000553674 BLOC1S1P78537 153 aa13.72□□□□□ -0.21
UBR7-202ENST00000553674 LYPD6BQ8NI32 183 aa13.72□□□□□ -0.21
UBR7-202ENST00000553674 C20orf173Q96LM9 149 aa13.72□□□□□ -0.21
UBR7-202ENST00000553674 ZNF331Q9NQX6 463 aaPredicted RBP13.72□□□□□ -0.21
UBR7-202ENST00000553674 ZNF253O75346 499 aa13.71□□□□□ -0.21
UBR7-202ENST00000553674 NMBP08949 121 aa13.71□□□□□ -0.21
UBR7-202ENST00000553674 MEOX2P50222 304 aa13.71□□□□□ -0.21
UBR7-202ENST00000553674 OR4C46A6NHA9 309 aa13.7□□□□□ -0.22
UBR7-202ENST00000553674 PDE6HQ13956 83 aa13.7□□□□□ -0.22
UBR7-202ENST00000553674 ZNF767PQ75MW2 155 aa13.7□□□□□ -0.22
UBR7-202ENST00000553674 RNF182Q8N6D2 247 aa13.7□□□□□ -0.22
UBR7-202ENST00000553674 LRRC20Q8TCA0 184 aa13.7□□□□□ -0.22
UBR7-202ENST00000553674 TMEM167BQ9NRX6 74 aa13.7□□□□□ -0.22
UBR7-202ENST00000553674 C19orf73Q9NVV2 129 aa13.7□□□□□ -0.22
UBR7-202ENST00000553674 ISLRO14498 428 aa13.69□□□□□ -0.22
UBR7-202ENST00000553674 CD7P09564 240 aa13.69□□□□□ -0.22
UBR7-202ENST00000553674 RANP62826 216 aaKnown RBP13.69□□□□□ -0.22
UBR7-202ENST00000553674 ODF3L2Q3SX64 289 aa13.69□□□□□ -0.22
UBR7-202ENST00000553674 KPRPQ5T749 579 aaPredicted RBP13.69□□□□□ -0.22
UBR7-202ENST00000553674 IQCF2Q8IXL9 164 aa13.69□□□□□ -0.22
UBR7-202ENST00000553674 EXOC3-AS1Q8N2X6 119 aa13.69□□□□□ -0.22
UBR7-202ENST00000553674 C16orf92Q96LL3 132 aa13.69□□□□□ -0.22
UBR7-202ENST00000553674 YTHDF2Q9Y5A9 579 aaKnown RBP13.69□□□□□ -0.22
UBR7-202ENST00000553674 HBE1P02100 147 aa13.68□□□□□ -0.22
UBR7-202ENST00000553674 ZNF688P0C7X2 276 aa13.68□□□□□ -0.22
UBR7-202ENST00000553674 PSMB3P49720 205 aa13.68□□□□□ -0.22
UBR7-202ENST00000553674 SLC50A1Q9BRV3 221 aa13.68□□□□□ -0.22
UBR7-202ENST00000553674 DEFB1P60022 68 aa13.67□□□□□ -0.22
UBR7-202ENST00000553674 PMS2P11Q13670 270 aa13.67□□□□□ -0.22
UBR7-202ENST00000553674 Q8N1Y9 231 aa13.67□□□□□ -0.22
UBR7-202ENST00000553674 PRR25Q96S07 402 aa13.67□□□□□ -0.22
UBR7-202ENST00000553674 Q9H3A6 140 aa13.67□□□□□ -0.22
UBR7-202ENST00000553674 MAP6D1Q9H9H5 199 aa13.67□□□□□ -0.22
UBR7-202ENST00000553674 NBEAL1Q6ZS30 2694 aa13.67□□□□□ -0.22
UBR7-202ENST00000553674 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 FAM74A7A6NL05 159 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 GGTLC3B5MD39 225 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 RGS13O14921 159 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 PRB4P10163 310 aaPredicted RBP13.66□□□□□ -0.22
UBR7-202ENST00000553674 ID1P41134 155 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 UBE2G2P60604 165 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 PSG9Q00887 426 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 ICAM4Q14773 271 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 PSG3Q16557 428 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 SAMD13Q5VXD3 122 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 LYPD1Q8N2G4 141 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 LINC00052Q96N35 136 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 SORL1Q92673 2214 aa13.66□□□□□ -0.22
UBR7-202ENST00000553674 NOTCH1P46531 2555 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 ZNF705FA8MVS1 300 aaPredicted RBP13.65□□□□□ -0.22
UBR7-202ENST00000553674 PRAC2D3DTV9 90 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 M0R3E3 92 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 PAGE4O60829 102 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 DEFB131AP59861 70 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 ZNF124Q15973 351 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 PSMG4Q5JS54 123 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 OTORQ9NRC9 128 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 GNG13Q9P2W3 67 aa13.65□□□□□ -0.22
UBR7-202ENST00000553674 PGPA6NDG6 321 aa13.64□□□□□ -0.23
UBR7-202ENST00000553674 TEX46H3BTG2 121 aa13.64□□□□□ -0.23
UBR7-202ENST00000553674 CD81P60033 236 aa13.64□□□□□ -0.23
UBR7-202ENST00000553674 SNRPD3P62318 126 aaKnown RBP13.64□□□□□ -0.23
UBR7-202ENST00000553674 CLLU1Q5K131 121 aa13.64□□□□□ -0.23
UBR7-202ENST00000553674 FAM110AQ9BQ89 295 aa13.64□□□□□ -0.23
UBR7-202ENST00000553674 WFDC10AQ9H1F0 79 aa13.64□□□□□ -0.23
UBR7-202ENST00000553674 SUMO1P63165 101 aaKnown RBP13.63□□□□□ -0.23
UBR7-202ENST00000553674 APRG1Q8IVJ8 170 aa13.63□□□□□ -0.23
UBR7-202ENST00000553674 CCDC28AQ8IWP9 274 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms