RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CST2P09228 141 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 CYBAP13498 195 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 MIFP14174 115 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 HSD11B1P28845 292 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 SRIP30626 198 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 CAPZBP47756 277 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 BRCA2P51587 3418 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 FOCADQ5VW36 1801 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 TEX36Q5VZQ5 186 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 DNAH12Q6ZR08 3092 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 ALPK2Q86TB3 2170 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 LINC00471Q8N535 108 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 PHIPQ8WWQ0 1821 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 ARAP2Q8WZ64 1704 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 KIFC1Q9BW19 673 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 PAPPA2Q9BXP8 1791 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 SPEF2Q9C093 1822 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 RNF122Q9H9V4 155 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 NMNAT1Q9HAN9 279 aaPredicted RBP1.53□□□□□ -2.16
SYNE2-210ENST00000553455 TVP23BQ9NYZ1 205 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 SOX21Q9Y651 276 aaPredicted RBP1.53□□□□□ -2.16
SYNE2-210ENST00000553455 MKI67P46013 3256 aaKnown RBP1.53□□□□□ -2.17
SYNE2-210ENST00000553455 DIDO1Q9BTC0 2240 aaKnown RBP1.52□□□□□ -2.17
SYNE2-210ENST00000553455 MYH13Q9UKX3 1938 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 CDK5RAP2Q96SN8 1893 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 MYO5AQ9Y4I1 1855 aaKnown RBP1.52□□□□□ -2.17
SYNE2-210ENST00000553455 DOCK2Q92608 1830 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 SSC5DA1L4H1 1573 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 HELZ2Q9BYK8 2649 aaKnown RBP1.52□□□□□ -2.17
SYNE2-210ENST00000553455 IGKV3-7A0A075B6H7 116 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 IGKV2-40A0A087WW87 121 aaPredicted RBP1.52□□□□□ -2.17
SYNE2-210ENST00000553455 TRAV1-1A0A0B4J248 108 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 HCRTO43612 131 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 IGKV2D-40P01614 121 aaPredicted RBP1.52□□□□□ -2.17
SYNE2-210ENST00000553455 OR4E1P0C645 316 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 YPEL3P61236 119 aaPredicted RBP1.52□□□□□ -2.17
SYNE2-210ENST00000553455 LIN52Q52LA3 116 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 SPANXN5Q5MJ07 72 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.52□□□□□ -2.17
SYNE2-210ENST00000553455 S100A7AQ86SG5 101 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 OR11H6Q8NGC7 330 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 OR13D1Q8NGV5 346 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 CHMP6Q96FZ7 201 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 BTF3L4Q96K17 158 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 PARVBQ9HBI1 364 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 OR5AC2Q9NZP5 309 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 RANBP2P49792 3224 aaKnown RBP1.52□□□□□ -2.17
SYNE2-210ENST00000553455 CASP8AP2Q9UKL3 1982 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 ANAPC1Q9H1A4 1944 aa1.52□□□□□ -2.17
SYNE2-210ENST00000553455 KIAA0100Q14667 2235 aaKnown RBP1.51□□□□□ -2.17
SYNE2-210ENST00000553455 PLIN4Q96Q06 1357 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 SZT2Q5T011 3432 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 PTPRFP10586 1907 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 MYH1P12882 1939 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 IGKV1-9A0A0C4DH69 117 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 C2orf70A6NJV1 201 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 ATP5HO75947 161 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 MRPS15P82914 257 aaKnown RBP1.51□□□□□ -2.17
SYNE2-210ENST00000553455 PHF13Q86YI8 300 aaPredicted RBP1.51□□□□□ -2.17
SYNE2-210ENST00000553455 LINC00311Q8N616 119 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 C12orf29Q8N999 325 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 OR8D4Q8NGM9 314 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 TMEM133Q9H2Q1 129 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 BOLA2Q9H3K6 86 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 TAS2R4Q9NYW5 299 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 ARL2BPQ9Y2Y0 163 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 COL6A6A6NMZ7 2263 aa1.51□□□□□ -2.17
SYNE2-210ENST00000553455 MYH7P12883 1935 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 PDE4DIPQ5VU43 2346 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 LAMA2P24043 3122 aaKnown RBP1.5□□□□□ -2.17
SYNE2-210ENST00000553455 RBBP6Q7Z6E9 1792 aaKnown RBP1.5□□□□□ -2.17
SYNE2-210ENST00000553455 A0A0C4DFX4 3053 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 A0A087X0T9 212 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 C1orf196B1AJZ1 125 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 CLDN25C9JDP6 229 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 OR2B3O76000 313 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 SERPINA1P01009 418 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 ARL14EPLP0DKL9 152 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 SERPINB9P50453 376 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 GPR146Q96CH1 333 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 PRO3102Q9H379 93 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 EPDR1Q9UM22 224 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 Q9Y3F1 56 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 TRANK1O15050 2925 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 CEP290O15078 2479 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 MGAMO43451 1857 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 PLXNB2O15031 1838 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 PARP14Q460N5 1801 aa1.5□□□□□ -2.17
SYNE2-210ENST00000553455 LOC285556D6RIA3 1793 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 DDX60LQ5H9U9 1706 aaKnown RBP1.49□□□□□ -2.17
SYNE2-210ENST00000553455 TRAV4A0A0B4J268 109 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 BAALC-AS2P0C853 105 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 SSR2P43308 183 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 MRPS25P82663 173 aaKnown RBP1.49□□□□□ -2.17
SYNE2-210ENST00000553455 PDE6HQ13956 83 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 RNASE10Q5GAN6 216 aaKnown RBP1.49□□□□□ -2.17
SYNE2-210ENST00000553455 OR10X1Q8NGY0 326 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 GNPDA2Q8TDQ7 276 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 TRABDQ9H4I3 376 aa1.49□□□□□ -2.17
SYNE2-210ENST00000553455 FAM32AQ9Y421 112 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms