RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 TUBA4BQ9H853 241 aa9.72□□□□□ -0.85
CACNB3-223ENST00000552480 IGHV3-66A0A0C4DH42 116 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 IGHV7-4-1A0A0J9YVY3 117 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 A0A1W2PS18 150 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 INAFM1C9JVW0 142 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 MT-ND4LP03901 98 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 TCRAP04437 139 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 CDX1P47902 265 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-223ENST00000552480 TMEM183BQ1AE95 376 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 RPEL1Q2QD12 228 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 RNF212Q495C1 297 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-223ENST00000552480 WIPF2Q8TF74 440 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-223ENST00000552480 GLMPQ8WWB7 406 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 ISOC2Q96AB3 205 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 AAMDCQ9H7C9 122 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 DAZ1Q9NQZ3 744 aaKnown RBP9.71□□□□□ -0.86
CACNB3-223ENST00000552480 TMEM242Q9NWH2 141 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 RPH3ALQ9UNE2 315 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 KLF12Q9Y4X4 402 aa9.71□□□□□ -0.86
CACNB3-223ENST00000552480 ANK3Q12955 4377 aaKnown RBP9.7□□□□□ -0.86
CACNB3-223ENST00000552480 IGHV3OR16-13A0A075B7E8 117 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 IGHV3-49A0A0A0MS15 119 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 IGHV3-74A0A0B4J1X5 117 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 ZNF320A2RRD8 509 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 CXorf65A6NEN9 183 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 PGPEP1LA6NFU8 196 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 NDUFA7O95182 113 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 UBE2G1P62253 170 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 Q71RC1 249 aaPredicted RBP9.7□□□□□ -0.86
CACNB3-223ENST00000552480 REC114Q7Z4M0 266 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 ARL6IP6Q8N6S5 226 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 C15orf54Q8N8G6 183 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 OCC1Q8TAD7 63 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 WFDC12Q8WWY7 111 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 ANAPC16Q96DE5 110 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 FMC1Q96HJ9 113 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 SLC50A1Q9BRV3 221 aa9.7□□□□□ -0.86
CACNB3-223ENST00000552480 IGHV4OR15-8A0A075B7B6 117 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 A0A087WW49 117 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 K7EN84 100 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 LGALS9O00182 355 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 ISLRO14498 428 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 IGLV2-8P01709 118 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 LINC01006Q8NI28 216 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 LINC00479Q96M42 142 aa9.69□□□□□ -0.86
CACNB3-223ENST00000552480 ZNF331Q9NQX6 463 aaPredicted RBP9.69□□□□□ -0.86
CACNB3-223ENST00000552480 TRAV34A0A0B4J273 112 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 TRBV6-1A0A0K0K1D8 114 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 SERTM2A0A1B0GWG4 89 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 A8MWP6 167 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 K7EQM0 130 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 PPP1R2P9O14990 202 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 BMI1P35226 326 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 CSN1S1P47710 185 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 TM4SF20Q53R12 229 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 GOLT1AQ6ZVE7 132 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 C1QL4Q86Z23 238 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 LURAP1LQ8IV03 231 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 TMEM75Q8N9X5 138 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 SMIM12Q96EX1 92 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 SFRP2Q96HF1 295 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 AURKAIP1Q9NWT8 199 aaPredicted RBP9.68□□□□□ -0.86
CACNB3-223ENST00000552480 SMPXQ9UHP9 88 aa9.68□□□□□ -0.86
CACNB3-223ENST00000552480 LINC01619G3V211 115 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 H7BYZ3 331 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 CHEK1O14757 476 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 TCF21O43680 179 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 GCGP01275 180 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 HOXD3P31249 432 aaPredicted RBP9.67□□□□□ -0.86
CACNB3-223ENST00000552480 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 C18orf65Q6ZTR6 163 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 Q86TA4 180 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 BAGE2Q86Y30 109 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 YPEL4Q96NS1 127 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
CACNB3-223ENST00000552480 TMEM213A2RRL7 107 aa9.66□□□□□ -0.86
CACNB3-223ENST00000552480 COLCA2A8K830 154 aa9.66□□□□□ -0.86
CACNB3-223ENST00000552480 M0R3E3 92 aa9.66□□□□□ -0.86
CACNB3-223ENST00000552480 CRLF1O75462 422 aa9.66□□□□□ -0.86
CACNB3-223ENST00000552480 LTAP01374 205 aa9.66□□□□□ -0.86
CACNB3-223ENST00000552480 C8orf86Q6ZUL3 223 aa9.66□□□□□ -0.86
CACNB3-223ENST00000552480 MRPL53Q96EL3 112 aaKnown RBP9.66□□□□□ -0.86
CACNB3-223ENST00000552480 CLEC5AQ9NY25 188 aa9.66□□□□□ -0.86
CACNB3-223ENST00000552480 FBLL1A6NHQ2 334 aaKnown RBP9.65□□□□□ -0.86
CACNB3-223ENST00000552480 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
CACNB3-223ENST00000552480 MGST1P10620 155 aaKnown RBP9.65□□□□□ -0.86
CACNB3-223ENST00000552480 CD28P10747 220 aa9.65□□□□□ -0.86
CACNB3-223ENST00000552480 SYNJ2BPP57105 145 aa9.65□□□□□ -0.86
CACNB3-223ENST00000552480 KLF5Q13887 457 aaPredicted RBP9.65□□□□□ -0.86
CACNB3-223ENST00000552480 PSG3Q16557 428 aa9.65□□□□□ -0.86
CACNB3-223ENST00000552480 KLHL30-AS1Q8NEE0 82 aa9.65□□□□□ -0.86
CACNB3-223ENST00000552480 OR10G8Q8NGN5 311 aa9.65□□□□□ -0.86
CACNB3-223ENST00000552480 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms