RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 GAGE12FP0CL80 117 aa14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 GAGE12GP0CL81 117 aa14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 GAGE12IP0CL82 117 aa14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 RPP30P78346 268 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 SPANXN5Q5MJ07 72 aa14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 ACOT7LQ6ZUV0 252 aa14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 LRTM2Q8N967 370 aa14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 RPUSD4Q96CM3 377 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 CIB3Q96Q77 187 aaPredicted RBP14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 PARD6GQ9BYG4 376 aaPredicted RBP14.88□□□□□ -0.03
SMARCD1-212ENST00000551966 FAT1Q14517 4588 aa14.87□□□□□ -0.03
SMARCD1-212ENST00000551966 MRPS12O15235 138 aaKnown RBP14.87□□□□□ -0.03
SMARCD1-212ENST00000551966 IL5P05113 134 aa14.87□□□□□ -0.03
SMARCD1-212ENST00000551966 PLP1P60201 277 aa14.87□□□□□ -0.03
SMARCD1-212ENST00000551966 RAP2BP61225 183 aa14.87□□□□□ -0.03
SMARCD1-212ENST00000551966 SPCS2Q15005 226 aa14.87□□□□□ -0.03
SMARCD1-212ENST00000551966 PGPEP1Q9NXJ5 209 aa14.87□□□□□ -0.03
SMARCD1-212ENST00000551966 H3BP45 60 aa14.86□□□□□ -0.03
SMARCD1-212ENST00000551966 HYPMO75409 117 aa14.86□□□□□ -0.03
SMARCD1-212ENST00000551966 PATE2Q6UY27 113 aa14.86□□□□□ -0.03
SMARCD1-212ENST00000551966 ADAP1O75689 374 aa14.85□□□□□ -0.03
SMARCD1-212ENST00000551966 OR5G3P0C626 314 aa14.85□□□□□ -0.03
SMARCD1-212ENST00000551966 TMEM128Q5BJH2 165 aa14.85□□□□□ -0.03
SMARCD1-212ENST00000551966 LRRC20Q8TCA0 184 aa14.85□□□□□ -0.03
SMARCD1-212ENST00000551966 VSIG2Q96IQ7 327 aa14.85□□□□□ -0.03
SMARCD1-212ENST00000551966 C20orf144Q9BQM9 153 aa14.85□□□□□ -0.03
SMARCD1-212ENST00000551966 A0A096LPF7 62 aa14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 PIGBOS1A0A0B4J2F0 54 aa14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 SNRPCP09234 159 aaKnown RBP14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 SMIM18P0DKX4 95 aa14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 GFI1BQ5VTD9 330 aa14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 TMED4Q7Z7H5 227 aa14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 RABL2AQ9UBK7 228 aaPredicted RBP14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 RABL2BQ9UNT1 228 aa14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 STRAPQ9Y3F4 350 aaKnown RBP14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 TNFRSF18Q9Y5U5 241 aa14.84□□□□□ -0.03
SMARCD1-212ENST00000551966 PMS2P5A8MQ11 134 aa14.83□□□□□ -0.04
SMARCD1-212ENST00000551966 PRAC2D3DTV9 90 aa14.83□□□□□ -0.04
SMARCD1-212ENST00000551966 RLN2P04090 185 aa14.83□□□□□ -0.04
SMARCD1-212ENST00000551966 LINC00869P0C866 280 aa14.83□□□□□ -0.04
SMARCD1-212ENST00000551966 CCDC28AQ8IWP9 274 aa14.83□□□□□ -0.04
SMARCD1-212ENST00000551966 SOSTQ9BQB4 213 aa14.83□□□□□ -0.04
SMARCD1-212ENST00000551966 TMPRSS5Q9H3S3 457 aa14.83□□□□□ -0.04
SMARCD1-212ENST00000551966 ZNF331Q9NQX6 463 aaPredicted RBP14.83□□□□□ -0.04
SMARCD1-212ENST00000551966 SMCO3A2RU48 225 aa14.82□□□□□ -0.04
SMARCD1-212ENST00000551966 Q5VSD8 79 aa14.82□□□□□ -0.04
SMARCD1-212ENST00000551966 ZBTB8BQ8NAP8 495 aaPredicted RBP14.82□□□□□ -0.04
SMARCD1-212ENST00000551966 DMBT1Q9UGM3 2413 aaPredicted RBP14.82□□□□□ -0.04
SMARCD1-212ENST00000551966 HOXB5P09067 269 aa14.81□□□□□ -0.04
SMARCD1-212ENST00000551966 VAMP1P23763 118 aa14.81□□□□□ -0.04
SMARCD1-212ENST00000551966 Q6ZTI0 123 aa14.81□□□□□ -0.04
SMARCD1-212ENST00000551966 ARL6Q9H0F7 186 aa14.81□□□□□ -0.04
SMARCD1-212ENST00000551966 RSL24D1Q9UHA3 163 aaKnown RBP14.81□□□□□ -0.04
SMARCD1-212ENST00000551966 SNURFLB1AK76 121 aa14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 CCNKO75909 580 aa14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 SFT2D2O95562 160 aa14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 ANXA7P20073 488 aaKnown RBP14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 KRTAP10-1P60331 282 aa14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 SELENOTP62341 195 aa14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 ID3Q02535 119 aa14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 ARV1Q9H2C2 271 aa14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 VPS13BQ7Z7G8 4022 aa14.8□□□□□ -0.04
SMARCD1-212ENST00000551966 SIVA1O15304 175 aa14.79□□□□□ -0.04
SMARCD1-212ENST00000551966 POLR2GP62487 172 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMARCD1-212ENST00000551966 DAZ2Q13117 558 aaKnown RBP14.79□□□□□ -0.04
SMARCD1-212ENST00000551966 PPP1R1AQ13522 171 aa14.79□□□□□ -0.04
SMARCD1-212ENST00000551966 J3KRW8 73 aa14.78□□□□□ -0.04
SMARCD1-212ENST00000551966 CT45A10P0DMU9 189 aa14.78□□□□□ -0.04
SMARCD1-212ENST00000551966 CXCL2P19875 107 aa14.78□□□□□ -0.04
SMARCD1-212ENST00000551966 CCDC190Q86UF4 302 aa14.78□□□□□ -0.04
SMARCD1-212ENST00000551966 DYNC2LI1Q8TCX1 351 aa14.78□□□□□ -0.04
SMARCD1-212ENST00000551966 PSENENQ9NZ42 101 aa14.78□□□□□ -0.04
SMARCD1-212ENST00000551966 TRAV12-3A0A0B4J271 114 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 LINC00854A0A1B0GVQ3 168 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 H3BTX0 84 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 SLC17A3O00476 420 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 TNFSF8P32971 234 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 RRAS2P62070 204 aaPredicted RBP14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 CDPF1Q6NVV7 123 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 LCN15Q6UWW0 184 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 ZNF431Q8TF32 576 aaPredicted RBP14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 FRZBQ92765 325 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 NPVFQ9HCQ7 196 aa14.77□□□□□ -0.05
SMARCD1-212ENST00000551966 K7EPK0 472 aa14.76□□□□□ -0.05
SMARCD1-212ENST00000551966 SMR3BP02814 79 aaPredicted RBP14.76□□□□□ -0.05
SMARCD1-212ENST00000551966 ERVFC1-1P60608 527 aa14.76□□□□□ -0.05
SMARCD1-212ENST00000551966 SLC50A1Q9BRV3 221 aa14.76□□□□□ -0.05
SMARCD1-212ENST00000551966 PTTG2Q9NZH5 202 aa14.76□□□□□ -0.05
SMARCD1-212ENST00000551966 MDFICQ9P1T7 246 aa14.76□□□□□ -0.05
SMARCD1-212ENST00000551966 MYCBP2O75592 4640 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 FABP12A6NFH5 140 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 EREGO14944 169 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 DNAH10OSP0CZ25 163 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 SLC38A11Q08AI6 406 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 MORN5Q5VZ52 161 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 LINC00305Q7Z4B0 112 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 S100A7AQ86SG5 101 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 C18orf15Q96N68 181 aa14.75□□□□□ -0.05
SMARCD1-212ENST00000551966 NXPH4O95158 308 aa14.74□□□□□ -0.05
SMARCD1-212ENST00000551966 C11orf72Q8NBR9 251 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms