RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PSG3Q16557 428 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 COX19Q49B96 90 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 C16orf54Q6UWD8 224 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 TMEM136Q6ZRR5 245 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 PRSS22Q9GZN4 317 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
RAB5C-208ENST00000551338 RPP21Q9H633 154 aaKnown RBP8.88□□□□□ -0.99
RAB5C-208ENST00000551338 AAMDCQ9H7C9 122 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 ZNF580Q9UK33 172 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 PSG8Q9UQ74 426 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 U3KQE9 123 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 ZNF785A8K8V0 405 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 NPIPB6E9PJ23 425 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 BUB3O43684 328 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 SPINK4O60575 86 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 HLA-DMBP28068 263 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 ARL3P36405 182 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 RAB9AP51151 201 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 SLC35B1P78383 322 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 RELQ04864 619 aaPredicted RBP8.87□□□□□ -0.99
RAB5C-208ENST00000551338 CT83Q5H943 113 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 MRPL54Q6P161 138 aaKnown RBP8.87□□□□□ -0.99
RAB5C-208ENST00000551338 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 GBGT1Q8N5D6 347 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 ARL6IP6Q8N6S5 226 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 TSKUQ8WUA8 353 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 Q96MF0 132 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 ASCL2Q99929 193 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 GNB1LQ9BYB4 327 aa8.87□□□□□ -0.99
RAB5C-208ENST00000551338 ZNF331Q9NQX6 463 aaPredicted RBP8.87□□□□□ -0.99
RAB5C-208ENST00000551338 SERTM2A0A1B0GWG4 89 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 K7EQM0 130 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 IGLV1-40P01703 118 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 TRBV12-3P01733 135 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 IGHG4P01861 327 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 APOHP02749 345 aaPredicted RBP8.86□□□□□ -0.99
RAB5C-208ENST00000551338 MT-ND6P03923 174 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 PLA2G2AP14555 144 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 S100A2P29034 98 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 RPL19P84098 196 aaKnown RBP8.86□□□□□ -0.99
RAB5C-208ENST00000551338 TMEM95Q3KNT9 176 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 WDR73Q6P4I2 378 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 C9orf139Q6ZV77 190 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 NUP35Q8NFH5 326 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 USMG5Q96IX5 58 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 NEU1Q99519 415 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 HIST1H2BLQ99880 126 aa8.86□□□□□ -0.99
RAB5C-208ENST00000551338 IGKV2-40A0A087WW87 121 aaPredicted RBP8.85□□□□□ -0.99
RAB5C-208ENST00000551338 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.85□□□□□ -0.99
RAB5C-208ENST00000551338 IGHV3-66A0A0C4DH42 116 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 A0A1B0GUS0 222 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 CHEK1O14757 476 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 ZNF207O43670 478 aaKnown RBP8.85□□□□□ -0.99
RAB5C-208ENST00000551338 IGKV2D-40P01614 121 aaPredicted RBP8.85□□□□□ -0.99
RAB5C-208ENST00000551338 P01737 135 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 HLA-DQA1P01909 254 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 AMBPP02760 352 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 PF4V1P10720 104 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 C1orf194Q5T5A4 169 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 TCF24Q7RTU0 167 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 OR4B1Q8NGF8 309 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 OR10D4PQ8NGN7 298 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 WIPF2Q8TF74 440 aaPredicted RBP8.85□□□□□ -0.99
RAB5C-208ENST00000551338 C8orf49Q96NF6 230 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 METTL26Q96S19 204 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 KLK15Q9H2R5 256 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 NAT8BQ9UHF3 227 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 TP53TG3Q9ULZ0 132 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 ZFP30Q9Y2G7 519 aa8.85□□□□□ -0.99
RAB5C-208ENST00000551338 CFAP46Q8IYW2 2715 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 IGHV3OR16-13A0A075B7E8 117 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 IGHV3-49A0A0A0MS15 119 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 IGHV3-74A0A0B4J1X5 117 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 NDUFA4O00483 81 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 IGHV3-11P01762 117 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 FABP4P15090 132 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 CSN1S1P47710 185 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 PYY3Q5JQD4 70 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 GDF5OSQ5U4N7 250 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 IGFL4Q6B9Z1 124 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 HIST2H2BCQ6DN03 193 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 RASL11AQ6T310 242 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 PRSS57Q6UWY2 283 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 LCNL1Q6ZST4 164 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 OR5R1Q8NH85 324 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 SLC50A1Q9BRV3 221 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 ZNF462Q96JM2 2506 aa8.84□□□□□ -0.99
RAB5C-208ENST00000551338 GRIFINA4D1Z8 144 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 HIGD1CA8MV81 97 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 A8MWL6 223 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 CRIP1P50238 77 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 LINC00310P59036 64 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 Q6YL49 198 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 TMEM256Q8N2U0 113 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 GTSF1Q8WW33 167 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 GLMPQ8WWB7 406 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 DAZAP1Q96EP5 407 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms