RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 Q9H8V8 135 aa9.48□□□□□ -0.89
TROAP-211ENST00000549891 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
TROAP-211ENST00000549891 H7BYZ3 331 aa9.47□□□□□ -0.89
TROAP-211ENST00000549891 NOL3O60936 208 aaKnown RBP9.47□□□□□ -0.89
TROAP-211ENST00000549891 CXCL2P19875 107 aa9.47□□□□□ -0.89
TROAP-211ENST00000549891 PPP1R1AQ13522 171 aa9.47□□□□□ -0.89
TROAP-211ENST00000549891 SPATA12Q7Z6I5 190 aa9.47□□□□□ -0.89
TROAP-211ENST00000549891 Q8N1X5 172 aa9.47□□□□□ -0.89
TROAP-211ENST00000549891 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
TROAP-211ENST00000549891 RPUSD4Q96CM3 377 aaKnown RBP9.47□□□□□ -0.89
TROAP-211ENST00000549891 GNPNAT1Q96EK6 184 aaPredicted RBP9.47□□□□□ -0.89
TROAP-211ENST00000549891 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
TROAP-211ENST00000549891 C20orf144Q9BQM9 153 aa9.47□□□□□ -0.89
TROAP-211ENST00000549891 SLIRPQ9GZT3 109 aaKnown RBP9.47□□□□□ -0.89
TROAP-211ENST00000549891 NOP10Q9NPE3 64 aaKnown RBP9.47□□□□□ -0.89
TROAP-211ENST00000549891 ANXA7P20073 488 aaKnown RBP9.46□□□□□ -0.9
TROAP-211ENST00000549891 M6PRP20645 277 aa9.46□□□□□ -0.9
TROAP-211ENST00000549891 OR5I1Q13606 314 aa9.46□□□□□ -0.9
TROAP-211ENST00000549891 PYDC2Q56P42 97 aa9.46□□□□□ -0.9
TROAP-211ENST00000549891 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
TROAP-211ENST00000549891 MCFD2Q8NI22 146 aa9.46□□□□□ -0.9
TROAP-211ENST00000549891 UHRF2Q96PU4 802 aa9.46□□□□□ -0.9
TROAP-211ENST00000549891 PSENENQ9NZ42 101 aa9.46□□□□□ -0.9
TROAP-211ENST00000549891 A0A1W2PPQ1 181 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 FNDC10F2Z333 226 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 BTF3P20290 206 aaKnown RBP9.45□□□□□ -0.9
TROAP-211ENST00000549891 UBE2MP61081 183 aaKnown RBP9.45□□□□□ -0.9
TROAP-211ENST00000549891 DLK1P80370 383 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 ID3Q02535 119 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 PXDC1Q5TGL8 231 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 LCN15Q6UWW0 184 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 RXFP4Q8TDU9 374 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 TRIM63Q969Q1 353 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 SLC50A1Q9BRV3 221 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 ARL6Q9H0F7 186 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 Q9H3A6 140 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 NPVFQ9HCQ7 196 aa9.45□□□□□ -0.9
TROAP-211ENST00000549891 TRAV26-1A0A087WT03 109 aa9.44□□□□□ -0.9
TROAP-211ENST00000549891 H3BNG1 76 aa9.44□□□□□ -0.9
TROAP-211ENST00000549891 RLN2P04090 185 aa9.44□□□□□ -0.9
TROAP-211ENST00000549891 POLR2GP62487 172 aaKnown RBP eCLIP9.44□□□□□ -0.9
TROAP-211ENST00000549891 TEPPQ6URK8 271 aa9.44□□□□□ -0.9
TROAP-211ENST00000549891 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
TROAP-211ENST00000549891 ARV1Q9H2C2 271 aa9.44□□□□□ -0.9
TROAP-211ENST00000549891 MGAT4CQ9UBM8 478 aa9.44□□□□□ -0.9
TROAP-211ENST00000549891 PMS2P5A8MQ11 134 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 SNURFLB1AK76 121 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 K7EPK0 472 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 ZNF701M0R085 212 aaPredicted RBP9.43□□□□□ -0.9
TROAP-211ENST00000549891 SSSCA1O60232 199 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 RRAS2P62070 204 aaPredicted RBP9.43□□□□□ -0.9
TROAP-211ENST00000549891 CCDC190Q86UF4 302 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 LINC00612Q8N6U2 182 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 OR10P1Q8NGE3 313 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 SMIM8Q96KF7 97 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 SCRT2Q9NQ03 307 aa9.43□□□□□ -0.9
TROAP-211ENST00000549891 ZNF331Q9NQX6 463 aaPredicted RBP9.43□□□□□ -0.9
TROAP-211ENST00000549891 A0A0J9YY99 117 aa9.42□□□□□ -0.9
TROAP-211ENST00000549891 GOSR2O14653 212 aa9.42□□□□□ -0.9
TROAP-211ENST00000549891 LINC00305Q7Z4B0 112 aa9.42□□□□□ -0.9
TROAP-211ENST00000549891 ZNF546Q86UE3 836 aa9.42□□□□□ -0.9
TROAP-211ENST00000549891 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
TROAP-211ENST00000549891 GAGE12BA1L429 117 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 C9orf170A2RU37 121 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 H3BMQ9 156 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 MRPS12O15235 138 aaKnown RBP9.41□□□□□ -0.9
TROAP-211ENST00000549891 GAGE7O76087 117 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 METTL15P1P0C7V9 234 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 GAGE12FP0CL80 117 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 GAGE12GP0CL81 117 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 GAGE12IP0CL82 117 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 S100A5P33763 92 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 SLC38A11Q08AI6 406 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 TMEM14EPQ6UXP3 125 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 PATE2Q6UY27 113 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 KRTAP1-5Q9BYS1 174 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 MRPS16Q9Y3D3 137 aaKnown RBP9.41□□□□□ -0.9
TROAP-211ENST00000549891 PXMP4Q9Y6I8 212 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 V9GYH0 126 aa9.41□□□□□ -0.9
TROAP-211ENST00000549891 APOBP04114 4563 aaKnown RBP9.41□□□□□ -0.9
TROAP-211ENST00000549891 TAS2R30P59541 319 aa9.4□□□□□ -0.9
TROAP-211ENST00000549891 ESRGQ1W209 222 aa9.4□□□□□ -0.9
TROAP-211ENST00000549891 C4orf46Q504U0 113 aa9.4□□□□□ -0.9
TROAP-211ENST00000549891 GFI1BQ5VTD9 330 aa9.4□□□□□ -0.9
TROAP-211ENST00000549891 GGACTQ9BVM4 153 aa9.4□□□□□ -0.9
TROAP-211ENST00000549891 AGPAT2O15120 278 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 COX7A2P2O60397 106 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 TSC22D2O75157 780 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 CCNKO75909 580 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 PRB4P10163 310 aaPredicted RBP9.39□□□□□ -0.91
TROAP-211ENST00000549891 HOXA5P20719 270 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 LEPP41159 167 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 KIR3DS1Q14943 382 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 ZNF586Q9NXT0 402 aa9.39□□□□□ -0.91
TROAP-211ENST00000549891 DNAH5Q8TE73 4624 aa9.38□□□□□ -0.91
TROAP-211ENST00000549891 NAP1L6A6NFF2 107 aa9.38□□□□□ -0.91
TROAP-211ENST00000549891 SCGB1D2O95969 90 aa9.38□□□□□ -0.91
TROAP-211ENST00000549891 INPP1P49441 399 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms