RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TRAV41A0A0B4J266 112 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 M0R143 59 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 HLA-DQA1P01909 254 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 RHOGP84095 191 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 OR10J3Q5JRS4 329 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 NAT8BQ9UHF3 227 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 BUB3O43684 328 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 IGHG4P01861 327 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 IGHV4-38-2P0DP08 117 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 CD33P20138 364 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 UBE2G1P62253 170 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 GNG5P63218 68 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 C15orf32Q32M92 178 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 Q56UQ5 140 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 GBGT1Q8N5D6 347 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 OR5R1Q8NH85 324 aa7.73□□□□□ -1.17
RAB5B-206ENST00000549505 RPP21Q9H633 154 aaKnown RBP7.73□□□□□ -1.17
RAB5B-206ENST00000549505 PKD1L2Q7Z442 2459 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 KLF5Q13887 457 aaPredicted RBP7.72□□□□□ -1.17
RAB5B-206ENST00000549505 OR5T1Q8NG75 326 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 UBR5O95071 2799 aaPredicted RBP7.72□□□□□ -1.17
RAB5B-206ENST00000549505 PKDREJQ9NTG1 2253 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 TRAV40A0A0B4J280 105 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 APOHP02749 345 aaPredicted RBP7.72□□□□□ -1.17
RAB5B-206ENST00000549505 TOMM20LQ6UXN7 152 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 CLUHP3Q96NS8 147 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 HIF1ANQ9NWT6 349 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 SPTBN4Q9H254 2564 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 XKRY2A2RUG3 117 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 LINC01548A6NM66 108 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 GZMBP10144 247 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 LEMD1Q68G75 181 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 TP53TG3Q9ULZ0 132 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 SELENOKQ9Y6D0 94 aa7.72□□□□□ -1.17
RAB5B-206ENST00000549505 NAV3Q8IVL0 2385 aa7.71□□□□□ -1.17
RAB5B-206ENST00000549505 K7EQM0 130 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 M0QZ24 198 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 SCGB1D1O95968 90 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 AMBPP02760 352 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 RPLP1P05386 114 aaKnown RBP7.71□□□□□ -1.18
RAB5B-206ENST00000549505 RBX1P62877 108 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 LBHQ53QV2 105 aaPredicted RBP7.71□□□□□ -1.18
RAB5B-206ENST00000549505 OR8I2Q8N0Y5 310 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 BLNKQ8WV28 456 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 MRPL18Q9H0U6 180 aaKnown RBP7.71□□□□□ -1.18
RAB5B-206ENST00000549505 ZNF331Q9NQX6 463 aaPredicted RBP7.71□□□□□ -1.18
RAB5B-206ENST00000549505 A0A1B0GW15 77 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 A8MWL6 223 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 ATP5G2Q06055 141 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 LINC00322Q6ZN03 302 aaPredicted RBP7.71□□□□□ -1.18
RAB5B-206ENST00000549505 BCL6BQ8N143 479 aaPredicted RBP7.71□□□□□ -1.18
RAB5B-206ENST00000549505 SLC50A1Q9BRV3 221 aa7.71□□□□□ -1.18
RAB5B-206ENST00000549505 OR2T8A6NH00 312 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 AVPP01185 164 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 LINC00310P59036 64 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 JOSD1Q15040 202 aaPredicted RBP7.7□□□□□ -1.18
RAB5B-206ENST00000549505 Q6AWC8 147 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 KRTAP1-3Q8IUG1 177 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 NUP35Q8NFH5 326 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 MYOZ3Q8TDC0 251 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 LRBAP50851 2863 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 TRAV34A0A0B4J273 112 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 HAX1O00165 279 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 NDUFA4O00483 81 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 RNF152Q8N8N0 203 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 TMUB1Q9BVT8 246 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 PSG8Q9UQ74 426 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 ABCA2Q9BZC7 2435 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 ABCA4P78363 2273 aa7.7□□□□□ -1.18
RAB5B-206ENST00000549505 PAFAH1B2P68402 229 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 EXOC3-AS1Q8N2X6 119 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 CMTM2Q8TAZ6 248 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 ZNF705FA8MVS1 300 aaPredicted RBP7.69□□□□□ -1.18
RAB5B-206ENST00000549505 CLEC3BP05452 202 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 ZNF705DP0CH99 300 aaPredicted RBP7.69□□□□□ -1.18
RAB5B-206ENST00000549505 ZNF705BP0CI00 300 aaPredicted RBP7.69□□□□□ -1.18
RAB5B-206ENST00000549505 PTTG1IPP53801 180 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 DEFB113Q30KQ7 82 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 Q8N2B8 174 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 AAMDCQ9H7C9 122 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 RP1L1Q8IWN7 2480 aaPredicted RBP7.69□□□□□ -1.18
RAB5B-206ENST00000549505 IGSF10Q6WRI0 2623 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 G3V318 75 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 PRB1P04280 392 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 IGHV4-31P0DP07 118 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 MGST1P10620 155 aaKnown RBP7.69□□□□□ -1.18
RAB5B-206ENST00000549505 IER3P46695 156 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.69□□□□□ -1.18
RAB5B-206ENST00000549505 K7EMT4 169 aa7.68□□□□□ -1.18
RAB5B-206ENST00000549505 RBPMS2Q6ZRY4 209 aaKnown RBP7.68□□□□□ -1.18
RAB5B-206ENST00000549505 CIARTQ8N365 385 aaPredicted RBP7.68□□□□□ -1.18
RAB5B-206ENST00000549505 GTSF1Q8WW33 167 aa7.68□□□□□ -1.18
RAB5B-206ENST00000549505 GLMPQ8WWB7 406 aa7.68□□□□□ -1.18
RAB5B-206ENST00000549505 ATRXP46100 2492 aa7.68□□□□□ -1.18
RAB5B-206ENST00000549505 MAP1BP46821 2468 aaKnown RBP7.68□□□□□ -1.18
RAB5B-206ENST00000549505 CFAP46Q8IYW2 2715 aa7.68□□□□□ -1.18
RAB5B-206ENST00000549505 CBLN1P23435 193 aa7.68□□□□□ -1.18
RAB5B-206ENST00000549505 CRIP1P50238 77 aa7.68□□□□□ -1.18
RAB5B-206ENST00000549505 ECSCRQ19T08 205 aa7.68□□□□□ -1.18
RAB5B-206ENST00000549505 GOLT1AQ6ZVE7 132 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms