RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 IGLV1-44P01699 117 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 IGHV3-13P01766 116 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 IGHV3-7P01780 117 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 CD24P25063 80 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 FOXA3P55318 350 aaPredicted RBP4.13□□□□□ -1.75
UBE2N-202ENST00000548946 ARF6P62330 175 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 GNG5P63218 68 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 SEC11AP67812 179 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 PAX2Q02962 417 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 MZT1Q08AG7 82 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 ZNF876PQ49A33 203 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 SPRNQ5BIV9 151 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 TMEM97Q5BJF2 176 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 C10orf113Q5VZT2 155 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 PVRIGQ6DKI7 326 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 PRR27Q6MZM9 219 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 RBPMS2Q6ZRY4 209 aaKnown RBP4.13□□□□□ -1.75
UBE2N-202ENST00000548946 OR1B1Q8NGR6 318 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 FAM222BQ8WU58 562 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 PGLYRP4Q96LB8 373 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 GPR82Q96P67 336 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 MAP1LC3CQ9BXW4 147 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 DEFB127Q9H1M4 99 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 ZNF430Q9H8G1 570 aaPredicted RBP4.13□□□□□ -1.75
UBE2N-202ENST00000548946 NDUFA4L2Q9NRX3 87 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 MRPL36Q9P0J6 103 aaKnown RBP4.13□□□□□ -1.75
UBE2N-202ENST00000548946 ABI3Q9P2A4 366 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 HSPB8Q9UJY1 196 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 FZR1Q9UM11 496 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 SPTBN5Q9NRC6 3674 aaKnown RBP4.13□□□□□ -1.75
UBE2N-202ENST00000548946 DNAJC13O75165 2243 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 TNCP24821 2201 aa4.13□□□□□ -1.75
UBE2N-202ENST00000548946 FAM186AA6NE01 2351 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 COL27A1Q8IZC6 1860 aaPredicted RBP4.12□□□□□ -1.75
UBE2N-202ENST00000548946 TRGV5A0A0B4J1U4 118 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 TCRBV4S1A1TA0A5B7 111 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 PGPA6NDG6 321 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 K7EP34 96 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 COX7A2P2O60397 106 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 LYZL6O75951 148 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 NCR2O95944 276 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 LTAP01374 205 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 SLC25A5P05141 298 aaKnown RBP4.12□□□□□ -1.75
UBE2N-202ENST00000548946 CRYGCP07315 174 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 CECR9P0C854 216 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 SAA1P0DJI8 122 aaPredicted RBP4.12□□□□□ -1.75
UBE2N-202ENST00000548946 FABP6P51161 128 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 LINC00696Q6ZRV3 163 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 SLC25A48Q6ZT89 311 aaKnown RBP4.12□□□□□ -1.75
UBE2N-202ENST00000548946 NEGR1Q7Z3B1 354 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 ZCCHC24Q8N2G6 241 aaKnown RBP4.12□□□□□ -1.75
UBE2N-202ENST00000548946 OR10W1Q8NGF6 305 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 TMEM167AQ8TBQ9 72 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 C17orf77Q96MU5 243 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 LITAFQ99732 161 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 MCRIP2Q9BUT9 160 aaKnown RBP4.12□□□□□ -1.75
UBE2N-202ENST00000548946 FNDC4Q9H6D8 234 aaPredicted RBP4.12□□□□□ -1.75
UBE2N-202ENST00000548946 RAB9BQ9NP90 201 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 UNC80Q8N2C7 3258 aa4.12□□□□□ -1.75
UBE2N-202ENST00000548946 CEP290O15078 2479 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 IGHV1-18A0A0C4DH31 117 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 A0A1W2PNU3 283 aaPredicted RBP4.11□□□□□ -1.75
UBE2N-202ENST00000548946 C7orf71A4D174 169 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 E7EUB6 86 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 KLRC4-KLRK1H3BQV0 150 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 P01737 135 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 IGHV4-39P01824 125 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 IGKV1-16P04430 117 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 ZNF883P0CG24 379 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 FAM106CPP0CH98 169 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 ACP1P24666 158 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 HTR1DP28221 377 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 LGALS7P47929 136 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 ZNF137PP52743 207 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 ZNF138P52744 262 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 RIPPLY3P57055 190 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 ERHP84090 104 aaKnown RBP4.11□□□□□ -1.75
UBE2N-202ENST00000548946 HIST2H2BDQ6DRA6 164 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 Q6ZT83 130 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 ZNF833PQ6ZTB9 187 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 PDPNQ86YL7 162 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 BPIFA4PQ86YQ2 179 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 TMEM105Q8N8V8 129 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 ZNRF1Q8ND25 227 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 STXBP6Q8NFX7 210 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 OR2Z1Q8NG97 314 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 OR1N2Q8NGR9 330 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 OR4A5Q8NH83 315 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 PERPQ96FX8 193 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 FMC1Q96HJ9 113 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 GAFA1Q96PS6 74 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 RPUSD1Q9UJJ7 312 aaKnown RBP4.11□□□□□ -1.75
UBE2N-202ENST00000548946 U3KQK5 164 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 XIRP2A4UGR9 3374 aa4.11□□□□□ -1.75
UBE2N-202ENST00000548946 PRR14LQ5THK1 2151 aa4.1□□□□□ -1.75
UBE2N-202ENST00000548946 A0A096LNJ9 63 aa4.1□□□□□ -1.75
UBE2N-202ENST00000548946 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.1□□□□□ -1.75
UBE2N-202ENST00000548946 M0R296 226 aa4.1□□□□□ -1.75
UBE2N-202ENST00000548946 SIVA1O15304 175 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms