RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 STAG3L3P0CL85 134 aa15.69■□□□□ 0.1
CACNB3-210ENST00000548874 PSMB3P49720 205 aa15.69■□□□□ 0.1
CACNB3-210ENST00000548874 CMC4P56277 68 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-210ENST00000548874 GUK1Q16774 197 aa15.69■□□□□ 0.1
CACNB3-210ENST00000548874 LCN15Q6UWW0 184 aa15.69■□□□□ 0.1
CACNB3-210ENST00000548874 PQLC2Q6ZP29 291 aa15.69■□□□□ 0.1
CACNB3-210ENST00000548874 SSX7Q7RTT5 188 aa15.69■□□□□ 0.1
CACNB3-210ENST00000548874 FXYD5Q96DB9 178 aa15.69■□□□□ 0.1
CACNB3-210ENST00000548874 PAXXQ9BUH6 204 aa15.69■□□□□ 0.1
CACNB3-210ENST00000548874 TRAV8-2A0A0B4J237 113 aa15.68■□□□□ 0.1
CACNB3-210ENST00000548874 CTXND1A0A1B0GTU2 59 aa15.68■□□□□ 0.1
CACNB3-210ENST00000548874 OR7C2O60412 319 aa15.68■□□□□ 0.1
CACNB3-210ENST00000548874 SNRPCP09234 159 aaKnown RBP15.68■□□□□ 0.1
CACNB3-210ENST00000548874 ZNF688P0C7X2 276 aa15.68■□□□□ 0.1
CACNB3-210ENST00000548874 SAT2Q96F10 170 aaPredicted RBP15.68■□□□□ 0.1
CACNB3-210ENST00000548874 UBQLN2Q9UHD9 624 aa15.68■□□□□ 0.1
CACNB3-210ENST00000548874 TRBV19A0A075B6N1 114 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 OR11H12B2RN74 326 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 HMGB3O15347 200 aaKnown RBP15.67■□□□□ 0.1
CACNB3-210ENST00000548874 ZNF253O75346 499 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 ID1P41134 155 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 SNRPD3P62318 126 aaKnown RBP15.67■□□□□ 0.1
CACNB3-210ENST00000548874 DPPA3Q6W0C5 159 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 RNF141Q8WVD5 230 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 C16orf92Q96LL3 132 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 SLC50A1Q9BRV3 221 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 WFDC10AQ9H1F0 79 aa15.67■□□□□ 0.1
CACNB3-210ENST00000548874 ZNF331Q9NQX6 463 aaPredicted RBP15.67■□□□□ 0.1
CACNB3-210ENST00000548874 H3BTX0 84 aa15.66■□□□□ 0.1
CACNB3-210ENST00000548874 SLC17A3O00476 420 aa15.66■□□□□ 0.1
CACNB3-210ENST00000548874 OR10J4P0C629 311 aa15.66■□□□□ 0.1
CACNB3-210ENST00000548874 FHITP49789 147 aa15.66■□□□□ 0.1
CACNB3-210ENST00000548874 DEFB131AP59861 70 aa15.66■□□□□ 0.1
CACNB3-210ENST00000548874 PDE6HQ13956 83 aa15.66■□□□□ 0.1
CACNB3-210ENST00000548874 PHYHIPLQ96FC7 376 aa15.66■□□□□ 0.1
CACNB3-210ENST00000548874 NDUFB4O95168 129 aa15.65■□□□□ 0.1
CACNB3-210ENST00000548874 NBEAP1P0C6P0 100 aa15.65■□□□□ 0.1
CACNB3-210ENST00000548874 ARL14EPLP0DKL9 152 aa15.65■□□□□ 0.1
CACNB3-210ENST00000548874 SULT1A2P50226 295 aa15.65■□□□□ 0.1
CACNB3-210ENST00000548874 UBE2L3P68036 154 aaKnown RBP15.65■□□□□ 0.1
CACNB3-210ENST00000548874 DEFA6Q01524 100 aa15.65■□□□□ 0.1
CACNB3-210ENST00000548874 PSMG4Q5JS54 123 aa15.65■□□□□ 0.1
CACNB3-210ENST00000548874 DEFB125Q8N687 156 aa15.65■□□□□ 0.1
CACNB3-210ENST00000548874 C20orf173Q96LM9 149 aa15.65■□□□□ 0.1
CACNB3-210ENST00000548874 A8MZ25 164 aa15.64■□□□□ 0.09
CACNB3-210ENST00000548874 CXorf1O96002 111 aa15.64■□□□□ 0.09
CACNB3-210ENST00000548874 RAB5CP51148 216 aa15.64■□□□□ 0.09
CACNB3-210ENST00000548874 IGFL4Q6B9Z1 124 aa15.64■□□□□ 0.09
CACNB3-210ENST00000548874 FAM213BQ8TBF2 198 aa15.64■□□□□ 0.09
CACNB3-210ENST00000548874 LRRC20Q8TCA0 184 aa15.64■□□□□ 0.09
CACNB3-210ENST00000548874 CITED4Q96RK1 184 aa15.64■□□□□ 0.09
CACNB3-210ENST00000548874 IGHV4-30-4P0DP06 118 aa15.63■□□□□ 0.09
CACNB3-210ENST00000548874 GCHFRP30047 84 aa15.63■□□□□ 0.09
CACNB3-210ENST00000548874 ZNF124Q15973 351 aa15.63■□□□□ 0.09
CACNB3-210ENST00000548874 APRG1Q8IVJ8 170 aa15.63■□□□□ 0.09
CACNB3-210ENST00000548874 SUN5Q8TC36 379 aa15.63■□□□□ 0.09
CACNB3-210ENST00000548874 BLNKQ8WV28 456 aa15.63■□□□□ 0.09
CACNB3-210ENST00000548874 LINC00052Q96N35 136 aa15.63■□□□□ 0.09
CACNB3-210ENST00000548874 FBN3Q75N90 2809 aa15.62■□□□□ 0.09
CACNB3-210ENST00000548874 MAP1LC3B2A6NCE7 125 aa15.62■□□□□ 0.09
CACNB3-210ENST00000548874 HLA-DMBP28068 263 aa15.62■□□□□ 0.09
CACNB3-210ENST00000548874 RNF182Q8N6D2 247 aa15.62■□□□□ 0.09
CACNB3-210ENST00000548874 MBD3L1Q8WWY6 194 aa15.62■□□□□ 0.09
CACNB3-210ENST00000548874 MAP1LC3BQ9GZQ8 125 aa15.62■□□□□ 0.09
CACNB3-210ENST00000548874 CLEC5AQ9NY25 188 aa15.62■□□□□ 0.09
CACNB3-210ENST00000548874 PSG9Q00887 426 aa15.61■□□□□ 0.09
CACNB3-210ENST00000548874 PSG3Q16557 428 aa15.61■□□□□ 0.09
CACNB3-210ENST00000548874 FAM74A1Q5RGS3 127 aa15.61■□□□□ 0.09
CACNB3-210ENST00000548874 ALKAL2Q6UX46 152 aa15.61■□□□□ 0.09
CACNB3-210ENST00000548874 SRD5A3Q9H8P0 318 aa15.61■□□□□ 0.09
CACNB3-210ENST00000548874 MEGF8Q7Z7M0 2845 aa15.59■□□□□ 0.09
CACNB3-210ENST00000548874 FGF8P55075 233 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-210ENST00000548874 LINC00322Q6ZN03 302 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-210ENST00000548874 LYPD1Q8N2G4 141 aa15.59■□□□□ 0.09
CACNB3-210ENST00000548874 MRAPQ8TCY5 172 aa15.59■□□□□ 0.09
CACNB3-210ENST00000548874 TMEM167BQ9NRX6 74 aa15.59■□□□□ 0.09
CACNB3-210ENST00000548874 KNCNA6PVL3 124 aa15.58■□□□□ 0.08
CACNB3-210ENST00000548874 H2AFB1P0C5Y9 115 aa15.58■□□□□ 0.08
CACNB3-210ENST00000548874 DEFB1P60022 68 aa15.58■□□□□ 0.08
CACNB3-210ENST00000548874 FOXI2Q6ZQN5 318 aa15.58■□□□□ 0.08
CACNB3-210ENST00000548874 EXOC3-AS1Q8N2X6 119 aa15.58■□□□□ 0.08
CACNB3-210ENST00000548874 SFT2D1Q8WV19 159 aa15.58■□□□□ 0.08
CACNB3-210ENST00000548874 MRPL53Q96EL3 112 aaKnown RBP15.58■□□□□ 0.08
CACNB3-210ENST00000548874 TMPRSS5Q9H3S3 457 aa15.58■□□□□ 0.08
CACNB3-210ENST00000548874 SAV1Q9H4B6 383 aaPredicted RBP15.58■□□□□ 0.08
CACNB3-210ENST00000548874 TUBA4BQ9H853 241 aa15.58■□□□□ 0.08
CACNB3-210ENST00000548874 RBMY1BA6NDE4 496 aaKnown RBP15.57■□□□□ 0.08
CACNB3-210ENST00000548874 RBMY1EA6NEQ0 496 aaKnown RBP15.57■□□□□ 0.08
CACNB3-210ENST00000548874 RBMY1DP0C7P1 496 aaKnown RBP15.57■□□□□ 0.08
CACNB3-210ENST00000548874 RANP62826 216 aaKnown RBP15.57■□□□□ 0.08
CACNB3-210ENST00000548874 GDF5OSQ5U4N7 250 aa15.57■□□□□ 0.08
CACNB3-210ENST00000548874 ZNF738Q8NE65 137 aa15.57■□□□□ 0.08
CACNB3-210ENST00000548874 Q9H3A6 140 aa15.57■□□□□ 0.08
CACNB3-210ENST00000548874 AAMDCQ9H7C9 122 aa15.57■□□□□ 0.08
CACNB3-210ENST00000548874 PRELID1Q9Y255 219 aa15.57■□□□□ 0.08
CACNB3-210ENST00000548874 TRAV1-1A0A0B4J248 108 aa15.56■□□□□ 0.08
CACNB3-210ENST00000548874 FRMD6-AS1P0C7T7 363 aa15.56■□□□□ 0.08
CACNB3-210ENST00000548874 HLA-DRB4P13762 266 aa15.56■□□□□ 0.08
CACNB3-210ENST00000548874 ICAM4Q14773 271 aa15.56■□□□□ 0.08
CACNB3-210ENST00000548874 DEFB121Q5J5C9 76 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms