RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 ZNF701M0R085 212 aaPredicted RBP13.86□□□□□ -0.19
GATC-202ENST00000548171 PLP1P60201 277 aa13.86□□□□□ -0.19
GATC-202ENST00000548171 ESRGQ1W209 222 aa13.86□□□□□ -0.19
GATC-202ENST00000548171 CYP2G1PQ6ZSU1 146 aa13.86□□□□□ -0.19
GATC-202ENST00000548171 TMED4Q7Z7H5 227 aa13.86□□□□□ -0.19
GATC-202ENST00000548171 RPUSD4Q96CM3 377 aaKnown RBP13.86□□□□□ -0.19
GATC-202ENST00000548171 STRAPQ9Y3F4 350 aaKnown RBP13.86□□□□□ -0.19
GATC-202ENST00000548171 OR5G3P0C626 314 aa13.85□□□□□ -0.19
GATC-202ENST00000548171 FAUP35544 74 aaKnown RBP13.85□□□□□ -0.19
GATC-202ENST00000548171 SELENOTP62341 195 aa13.85□□□□□ -0.19
GATC-202ENST00000548171 CCDC28AQ8IWP9 274 aa13.85□□□□□ -0.19
GATC-202ENST00000548171 A0A0J9YY99 117 aa13.84□□□□□ -0.19
GATC-202ENST00000548171 RLN2P04090 185 aa13.84□□□□□ -0.19
GATC-202ENST00000548171 LINC00869P0C866 280 aa13.84□□□□□ -0.19
GATC-202ENST00000548171 CXCL2P19875 107 aa13.84□□□□□ -0.19
GATC-202ENST00000548171 VAMP1P23763 118 aa13.84□□□□□ -0.19
GATC-202ENST00000548171 HOXA5P20719 270 aa13.83□□□□□ -0.2
GATC-202ENST00000548171 SPCS2Q15005 226 aa13.83□□□□□ -0.2
GATC-202ENST00000548171 PTTG2Q9NZH5 202 aa13.83□□□□□ -0.2
GATC-202ENST00000548171 SMCO3A2RU48 225 aa13.82□□□□□ -0.2
GATC-202ENST00000548171 SNURFLB1AK76 121 aa13.82□□□□□ -0.2
GATC-202ENST00000548171 H3BP45 60 aa13.82□□□□□ -0.2
GATC-202ENST00000548171 SMIM18P0DKX4 95 aa13.82□□□□□ -0.2
GATC-202ENST00000548171 DLK1P80370 383 aa13.82□□□□□ -0.2
GATC-202ENST00000548171 LCN15Q6UWW0 184 aa13.82□□□□□ -0.2
GATC-202ENST00000548171 PGPEP1Q9NXJ5 209 aa13.82□□□□□ -0.2
GATC-202ENST00000548171 ZNF586Q9NXT0 402 aa13.82□□□□□ -0.2
GATC-202ENST00000548171 CCDC59Q9P031 241 aaKnown RBP13.82□□□□□ -0.2
GATC-202ENST00000548171 PMS2P5A8MQ11 134 aa13.81□□□□□ -0.2
GATC-202ENST00000548171 SLC50A1Q9BRV3 221 aa13.81□□□□□ -0.2
GATC-202ENST00000548171 DNAH5Q8TE73 4624 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 GAGE12BA1L429 117 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 GAGE7O76087 117 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 SFT2D2O95562 160 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 GAGE12FP0CL80 117 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 GAGE12GP0CL81 117 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 GAGE12IP0CL82 117 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 ANXA7P20073 488 aaKnown RBP13.8□□□□□ -0.2
GATC-202ENST00000548171 LINC00315P59091 139 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 PXDC1Q5TGL8 231 aa13.8□□□□□ -0.2
GATC-202ENST00000548171 SLC25A21Q9BQT8 299 aaPredicted RBP13.8□□□□□ -0.2
GATC-202ENST00000548171 ZNF331Q9NQX6 463 aaPredicted RBP13.8□□□□□ -0.2
GATC-202ENST00000548171 FABP12A6NFH5 140 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 K7EPK0 472 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 EREGO14944 169 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 MRPS12O15235 138 aaKnown RBP13.79□□□□□ -0.2
GATC-202ENST00000548171 HOXB5P09067 269 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 INAFM2P0DMQ5 153 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 AP3S2P59780 193 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 GFI1BQ5VTD9 330 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 CDPF1Q6NVV7 123 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 SOSTQ9BQB4 213 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 ARL6Q9H0F7 186 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 ARV1Q9H2C2 271 aa13.79□□□□□ -0.2
GATC-202ENST00000548171 FNDC10F2Z333 226 aa13.78□□□□□ -0.2
GATC-202ENST00000548171 ID3Q02535 119 aa13.78□□□□□ -0.2
GATC-202ENST00000548171 DAZ2Q13117 558 aaKnown RBP13.78□□□□□ -0.2
GATC-202ENST00000548171 PPP1R1AQ13522 171 aa13.78□□□□□ -0.2
GATC-202ENST00000548171 KIR3DS1Q14943 382 aa13.78□□□□□ -0.2
GATC-202ENST00000548171 Q6ZRN7 208 aaPredicted RBP13.78□□□□□ -0.2
GATC-202ENST00000548171 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
GATC-202ENST00000548171 LYPD1Q8N2G4 141 aa13.78□□□□□ -0.2
GATC-202ENST00000548171 DYNC2LI1Q8TCX1 351 aa13.78□□□□□ -0.2
GATC-202ENST00000548171 C4orf46Q504U0 113 aa13.77□□□□□ -0.21
GATC-202ENST00000548171 PATE2Q6UY27 113 aa13.77□□□□□ -0.21
GATC-202ENST00000548171 RAB2BQ8WUD1 216 aa13.77□□□□□ -0.21
GATC-202ENST00000548171 TMPRSS5Q9H3S3 457 aa13.77□□□□□ -0.21
GATC-202ENST00000548171 NPVFQ9HCQ7 196 aa13.77□□□□□ -0.21
GATC-202ENST00000548171 PSENENQ9NZ42 101 aa13.77□□□□□ -0.21
GATC-202ENST00000548171 HERC1Q15751 4861 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 SIVA1O15304 175 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 PRB4P10163 310 aaPredicted RBP13.76□□□□□ -0.21
GATC-202ENST00000548171 TNFSF8P32971 234 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 ERVFC1-1P60608 527 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 BPIFA4PQ86YQ2 179 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 TOMM5Q8N4H5 51 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 DEDD2Q8WXF8 326 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 ODF3Q96PU9 254 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 PYGO2Q9BRQ0 406 aa13.76□□□□□ -0.21
GATC-202ENST00000548171 PARD6GQ9BYG4 376 aaPredicted RBP13.76□□□□□ -0.21
GATC-202ENST00000548171 A0A096LPF7 62 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 LEPP41159 167 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 POLR2GP62487 172 aaKnown RBP eCLIP13.75□□□□□ -0.21
GATC-202ENST00000548171 Q6ZTI0 123 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 ZNF546Q86UE3 836 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 VSIG2Q96IQ7 327 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 SMIM8Q96KF7 97 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 C18orf15Q96N68 181 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 MRPS26Q9BYN8 205 aaKnown RBP13.75□□□□□ -0.21
GATC-202ENST00000548171 PXMP4Q9Y6I8 212 aa13.75□□□□□ -0.21
GATC-202ENST00000548171 GOSR2O14653 212 aa13.74□□□□□ -0.21
GATC-202ENST00000548171 UBE2MP61081 183 aaKnown RBP13.74□□□□□ -0.21
GATC-202ENST00000548171 RRAS2P62070 204 aaPredicted RBP13.74□□□□□ -0.21
GATC-202ENST00000548171 OR10P1Q8NGE3 313 aa13.74□□□□□ -0.21
GATC-202ENST00000548171 TRIM63Q969Q1 353 aa13.74□□□□□ -0.21
GATC-202ENST00000548171 MGAT4CQ9UBM8 478 aa13.74□□□□□ -0.21
GATC-202ENST00000548171 TRGV2A0A075B6R0 118 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms