RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 LOXL1Q08397 574 aaPredicted RBP9.12□□□□□ -0.95
RNF41-203ENST00000547967 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
RNF41-203ENST00000547967 BTF3L4Q96K17 158 aa9.12□□□□□ -0.95
RNF41-203ENST00000547967 GPR61Q9BZJ8 451 aa9.12□□□□□ -0.95
RNF41-203ENST00000547967 RNF24Q9Y225 148 aa9.12□□□□□ -0.95
RNF41-203ENST00000547967 CR1P17927 2039 aa9.12□□□□□ -0.95
RNF41-203ENST00000547967 C19orf54Q5BKX5 351 aa9.12□□□□□ -0.95
RNF41-203ENST00000547967 CIARTQ8N365 385 aaPredicted RBP9.12□□□□□ -0.95
RNF41-203ENST00000547967 C12orf57Q99622 126 aa9.12□□□□□ -0.95
RNF41-203ENST00000547967 BEX4Q9NWD9 120 aaPredicted RBP9.12□□□□□ -0.95
RNF41-203ENST00000547967 MYO9AB2RTY4 2548 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 XKRY2A2RUG3 117 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 GATCO43716 136 aaKnown RBP9.11□□□□□ -0.95
RNF41-203ENST00000547967 LTAP01374 205 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 TRBV12-3P01733 135 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 APOHP02749 345 aaPredicted RBP9.11□□□□□ -0.95
RNF41-203ENST00000547967 IGF1P05019 195 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 PF4V1P10720 104 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 RPL7P18124 248 aaKnown RBP9.11□□□□□ -0.95
RNF41-203ENST00000547967 CDX1P47902 265 aaPredicted RBP9.11□□□□□ -0.95
RNF41-203ENST00000547967 MRPL54Q6P161 138 aaKnown RBP9.11□□□□□ -0.95
RNF41-203ENST00000547967 MLST8Q9BVC4 326 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 SMAD5-AS1Q9Y6J3 95 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 FLNAP21333 2647 aaKnown RBP9.11□□□□□ -0.95
RNF41-203ENST00000547967 IGLV2-11P01706 119 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 KLK9Q2XQG4 91 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 AAMDCQ9H7C9 122 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 KLK9Q9UKQ9 250 aa9.11□□□□□ -0.95
RNF41-203ENST00000547967 M0QZK8 103 aa9.1□□□□□ -0.95
RNF41-203ENST00000547967 PPIFP30405 207 aaKnown RBP9.1□□□□□ -0.95
RNF41-203ENST00000547967 RAB4BP61018 213 aa9.1□□□□□ -0.95
RNF41-203ENST00000547967 GAR1Q9NY12 217 aaKnown RBP9.1□□□□□ -0.95
RNF41-203ENST00000547967 ACANP16112 2415 aa9.1□□□□□ -0.95
RNF41-203ENST00000547967 CLPSL1A2RUU4 121 aa9.1□□□□□ -0.95
RNF41-203ENST00000547967 PCP4L1A6NKN8 68 aa9.1□□□□□ -0.95
RNF41-203ENST00000547967 J3QLI3 93 aa9.1□□□□□ -0.95
RNF41-203ENST00000547967 HLA-DMBP28068 263 aa9.1□□□□□ -0.95
RNF41-203ENST00000547967 Q86TA4 180 aa9.1□□□□□ -0.95
RNF41-203ENST00000547967 SMIM27A0A1W2PRY6 76 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 FAM223BA6NKX1 122 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 ZNF785A8K8V0 405 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 SNURFLB1AK76 121 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 DIRC3C9JPN6 131 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 BUB3O43684 328 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 MEOX2P50222 304 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 CRIP2P52943 208 aaPredicted RBP9.09□□□□□ -0.95
RNF41-203ENST00000547967 FAM223AQ8IWN6 122 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 HIST3H2BBQ8N257 126 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 A0A1B0GUS0 222 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 ZNF705FA8MVS1 300 aaPredicted RBP9.09□□□□□ -0.95
RNF41-203ENST00000547967 S100A9P06702 114 aaKnown RBP9.09□□□□□ -0.95
RNF41-203ENST00000547967 PLA2G2AP14555 144 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 FABP4P15090 132 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 ARL3P36405 182 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 PDE6HQ13956 83 aa9.09□□□□□ -0.95
RNF41-203ENST00000547967 DAZAP1Q96EP5 407 aaKnown RBP9.09□□□□□ -0.95
RNF41-203ENST00000547967 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
RNF41-203ENST00000547967 GRIFINA4D1Z8 144 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 J3QKU1 62 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 K7EQM0 130 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 S100A2P29034 98 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 RELQ04864 619 aaPredicted RBP9.08□□□□□ -0.96
RNF41-203ENST00000547967 PRR31Q5SQ13 230 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 FAM231DQ6ZW35 169 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 DUX5Q96PT3 197 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 TRAV9-1A0A075B6T8 112 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 IGKV2-40A0A087WW87 121 aaPredicted RBP9.08□□□□□ -0.96
RNF41-203ENST00000547967 HIGD1CA8MV81 97 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 IGKV2D-40P01614 121 aaPredicted RBP9.08□□□□□ -0.96
RNF41-203ENST00000547967 P01737 135 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 S100A8P05109 93 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 CSN1S1P47710 185 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 PSG3Q16557 428 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 TCF24Q7RTU0 167 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 TMEM183AQ8IXX5 376 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 NUP35Q8NFH5 326 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 METTL26Q96S19 204 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 NEU1Q99519 415 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 NAT8BQ9UHF3 227 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 PSG8Q9UQ74 426 aa9.08□□□□□ -0.96
RNF41-203ENST00000547967 GCN1Q92616 2671 aaKnown RBP9.07□□□□□ -0.96
RNF41-203ENST00000547967 PSG9Q00887 426 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 C10orf99Q6UWK7 81 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 UNQ9165/PRO28630Q6UXU0 137 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 KRTAP1-3Q8IUG1 177 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 RNF182Q8N6D2 247 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 WFDC11Q8NEX6 87 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 OR10D4PQ8NGN7 298 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 MBD6Q96DN6 1003 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 GRAMD2BQ96HH9 432 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 SMAD7O15105 426 aaKnown RBP9.07□□□□□ -0.96
RNF41-203ENST00000547967 GZMBP10144 247 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 SMIM12Q96EX1 92 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 ZC2HC1AQ96GY0 325 aa9.07□□□□□ -0.96
RNF41-203ENST00000547967 SELENOKQ9Y6D0 94 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms