RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TPI1P60174 286 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 RPS11P62280 158 aaKnown RBP eCLIP2.48□□□□□ -2.01
SCAF11-210ENST00000547654 S100A12P80511 92 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 FLI1Q01543 452 aaPredicted RBP2.48□□□□□ -2.01
SCAF11-210ENST00000547654 MEF2BQ02080 365 aaPredicted RBP2.48□□□□□ -2.01
SCAF11-210ENST00000547654 MIAQ16674 131 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 KRTAP25-1Q3LHN0 102 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 TMEM128Q5BJH2 165 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 AMMECR1LQ6DCA0 310 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 LYPD6Q86Y78 171 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 C1orf64Q8NEQ6 169 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 CLDND2Q8NHS1 167 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 SMCR5Q8TEV8 140 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 MBD3L1Q8WWY6 194 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 SERPINI1Q99574 410 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 DERL1Q9BUN8 251 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 TTTY13Q9BZ97 58 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 SPANXA1Q9NS26 97 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 MED11Q9P086 117 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 MYH2Q9UKX2 1941 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 DSCAML1Q8TD84 2053 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 ROCK2O75116 1388 aaKnown RBP2.48□□□□□ -2.01
SCAF11-210ENST00000547654 NID2Q14112 1375 aa2.48□□□□□ -2.01
SCAF11-210ENST00000547654 PCLOQ9Y6V0 5065 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 FOCADQ5VW36 1801 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 NOTCH1P46531 2555 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 A0A1B0GU33 70 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 DUXBA0A1W2PPF3 345 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 IRGMA1A4Y4 181 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 TMEM235A6NFC5 223 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 C17orf98A8MV24 154 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 PSCAO43653 123 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 UCHL1P09936 223 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 TFPTP0C1Z6 253 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 GZMHP20718 246 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 RPS4Y1P22090 263 aaKnown RBP2.47□□□□□ -2.01
SCAF11-210ENST00000547654 CD24P25063 80 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 XCL1P47992 114 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 PSMD8P48556 350 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 PIGPP57054 158 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 DEFB103AP81534 67 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 FAM229BQ4G0N7 80 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.47□□□□□ -2.01
SCAF11-210ENST00000547654 TMEM78Q5T7P6 136 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 SAMD13Q5VXD3 122 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 IGFL3Q6UXB1 125 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 RNF182Q8N6D2 247 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 Q8NAQ8 132 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 OR13D1Q8NGV5 346 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 CCDC32Q9BV29 185 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 SLC39A9Q9NUM3 307 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 GINS2Q9Y248 185 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 MED13Q9UHV7 2174 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 CCDC168Q8NDH2 2452 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 TRIP11Q15643 1979 aa2.47□□□□□ -2.01
SCAF11-210ENST00000547654 LCTP09848 1927 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 IGHV3-15A0A0B4J1V0 119 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 TRAV38-1A0A0B4J264 116 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 CST8O60676 142 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 ZNF22P17026 224 aaPredicted RBP2.46□□□□□ -2.02
SCAF11-210ENST00000547654 HLA-DMBP28068 263 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 CA5AP35218 305 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 CCR2P41597 374 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 EMP1P54849 157 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 SPANXN3Q5MJ09 141 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 C2orf91Q6ZV80 131 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 CROCCP2Q86T23 111 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 BPIFA4PQ86YQ2 179 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 OR10D4PQ8NGN7 298 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 DNAJC9Q8WXX5 260 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 MAFIPQ8WZ33 124 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 FGF13Q92913 245 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 CAPZA3Q96KX2 299 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 C16orf95Q9H693 158 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 LAMTOR3Q9UHA4 124 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 R4GN34 69 aa2.46□□□□□ -2.02
SCAF11-210ENST00000547654 FLNAP21333 2647 aaKnown RBP2.46□□□□□ -2.02
SCAF11-210ENST00000547654 ZNF469Q96JG9 3925 aaPredicted RBP2.46□□□□□ -2.02
SCAF11-210ENST00000547654 NBEAL2Q6ZNJ1 2754 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 NBASA2RRP1 2371 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 RTTNQ86VV8 2226 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 IGKV1D-43A0A0B4J1Z2 117 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 TRAV41A0A0B4J266 112 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 A0A0J9YW62 118 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 MDFIC2A0A1B0GVS7 189 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 A0A1W2PRE2 83 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 TRAPPC2LH3BP13 241 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 PIAS1O75925 651 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 IGKV1-5P01602 117 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 SCGB1A1P11684 91 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 COL8A2P25067 703 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 ALDH3A1P30838 453 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 ZNF80P51504 273 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-210ENST00000547654 YPEL3P61236 119 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-210ENST00000547654 FKBP1CQ5VVH2 108 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 TOMM20LQ6UXN7 152 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 LCA10Q71F78 164 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 DEFB128Q7Z7B8 93 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 TRAPPC6BQ86SZ2 158 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 CLVS1Q8IUQ0 354 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms