RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	C1QA	P02745	245 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	RBP4	P02753	201 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	TRGC1	P0CF51	173 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	CSN1S1	P47710	185 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	KRTAP10-10	P60014	251 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	HIST1H4A	P62805	103 aa	Known RBP	2.55	□□□□□ -2
LGR5-204	ENST00000547310	RPL30	P62888	115 aa	Known RBP	2.55	□□□□□ -2
LGR5-204	ENST00000547310	RALGAPA2	Q2PPJ7	1873 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	KHDC3L	Q587J8	217 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	DENND4C	Q5VZ89	1909 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	LGALS9C	Q6DKI2	356 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	CEMP1	Q6PRD7	247 aa	Predicted RBP	2.55	□□□□□ -2
LGR5-204	ENST00000547310	LOXHD1	Q8IVV2	1947 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	LMTK2	Q8IWU2	1503 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	ORMDL3	Q8N138	153 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	LINC00471	Q8N535	108 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	PKMYT1	Q99640	499 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	ABCA3	Q99758	1704 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	SHANK2-AS3	Q9BTD1	123 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	SLC35B3	Q9H1N7	401 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	NPVF	Q9HCQ7	196 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	XAGE1A	Q9HD64	81 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	UQCR10	Q9UDW1	63 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	PIKFYVE	Q9Y2I7	2098 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	CCDC88A	Q3V6T2	1871 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	SPHKAP	Q2M3C7	1700 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	MAGI3	Q5TCQ9	1506 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	TOPBP1	Q92547	1522 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	HFM1	A2PYH4	1435 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	IGLV1-50	A0A075B6I6	118 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	IGHV3-72	A0A0B4J1Y9	119 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	FAM24A	A6NFZ4	105 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310		A8MWL6	223 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310		F8W1H4	67 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310		K7EP34	96 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	HBD	P02042	147 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	FABP4	P15090	132 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	ASIP	P42127	132 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	SNRPD3	P62318	126 aa	Known RBP	2.54	□□□□□ -2
LGR5-204	ENST00000547310	MRPS36	P82909	103 aa	Known RBP	2.54	□□□□□ -2
LGR5-204	ENST00000547310	BSPH1	Q075Z2	132 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	ALKAL2	Q6UX46	152 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	OR10G2	Q8NGC3	310 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	RNASE6	Q93091	150 aa	Known RBP	2.54	□□□□□ -2
LGR5-204	ENST00000547310	MAL2	Q969L2	176 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	MRPS24	Q96EL2	167 aa	Known RBP	2.54	□□□□□ -2
LGR5-204	ENST00000547310	DNAJC15	Q9Y5T4	150 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	ZNF638	Q14966	1978 aa	Known RBP	2.54	□□□□□ -2
LGR5-204	ENST00000547310	NUP210L	Q5VU65	1888 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	ARAP2	Q8WZ64	1704 aa		2.54	□□□□□ -2
LGR5-204	ENST00000547310	ADGRB1	O14514	1584 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	CEP164	Q9UPV0	1460 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	IGLV11-55	A0A075B6I3	123 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	IGKV1-6	A0A0C4DH72	117 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	IGKV1-12	A0A0C4DH73	117 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	LOC107986453	A0A1B0GWG9	222 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	OOSP1	A8MZH6	123 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310		M0R129	80 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	PITX3	O75364	302 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	SLC25A14	O95258	325 aa	Predicted RBP	2.53	□□□□□ -2
LGR5-204	ENST00000547310	IGKV1-39	P01597	117 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	IGKV1D-12	P01611	117 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	GYPA	P02724	150 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	MT-ATP8	P03928	68 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	IGKV1D-39	P04432	117 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	GYPB	P06028	91 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	SLC25A4	P12235	298 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	RNASE4	P34096	147 aa	Known RBP	2.53	□□□□□ -2
LGR5-204	ENST00000547310	RPL18	Q07020	188 aa	Known RBP	2.53	□□□□□ -2
LGR5-204	ENST00000547310	UNQ5815/PRO19632	Q6UWF5	114 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	C7orf65	Q6ZTY9	151 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	DAND5	Q8N907	189 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	WFDC5	Q8TCV5	224 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	ZNF431	Q8TF32	576 aa	Predicted RBP	2.53	□□□□□ -2
LGR5-204	ENST00000547310	DIRC1	Q969H9	104 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	HIST1H2BL	Q99880	126 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	B9D2	Q9BPU9	175 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	NPCDR1	Q9BY65	106 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	FGF23	Q9GZV9	251 aa	Predicted RBP	2.53	□□□□□ -2
LGR5-204	ENST00000547310	EPDR1	Q9UM22	224 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	ZNF835	Q9Y2P0	537 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	TPRKB	Q9Y3C4	175 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	LINC00588	Q9Y4M8	146 aa		2.53	□□□□□ -2
LGR5-204	ENST00000547310	PRDM15	P57071	1507 aa	Predicted RBP	2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	ABCC2	Q92887	1545 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	DLC1	Q96QB1	1528 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	MYH9	P35579	1960 aa	Known RBP	2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	COL1A1	P02452	1464 aa	Predicted RBP	2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	PLEKHH2	Q8IVE3	1493 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	SIPA1L1	O43166	1804 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	IGHV3-43	A0A0B4J1X8	118 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	IGLC7	A0M8Q6	106 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	C7orf66	A4D0T2	115 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	INS-IGF2	F8WCM5	200 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	SSSCA1	O60232	199 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	HYPM	O75409	117 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	SNCG	O76070	127 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	NDUFB6	O95139	128 aa		2.52	□□□□□ -2.01
LGR5-204	ENST00000547310	CYB5A	P00167	134 aa		2.52	□□□□□ -2.01

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