RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DYNLRB1Q9NP97 96 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 Q9UFV3 132 aa6.91□□□□□ -1.3
TDP1-204ENST00000545686 RALYQ9UKM9 306 aaKnown RBP6.91□□□□□ -1.3
TDP1-204ENST00000545686 TRAV8-6A0A0B4J262 113 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 WI2-2373I1.2A0A1W2PRP0 233 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 NCR2O95944 276 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 CRIP1P50238 77 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 PSMG4Q5JS54 123 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 FAM104BQ5XKR9 115 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 Q71RC1 249 aaPredicted RBP6.9□□□□□ -1.3
TDP1-204ENST00000545686 BOD1L2Q8IYS8 172 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 ORMDL3Q8N138 153 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 ZNF491Q8N8L2 437 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 ZNF48Q96MX3 618 aaPredicted RBP6.9□□□□□ -1.3
TDP1-204ENST00000545686 MCRIP2Q9BUT9 160 aaKnown RBP6.9□□□□□ -1.3
TDP1-204ENST00000545686 AAMDCQ9H7C9 122 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 SIGLEC8Q9NYZ4 499 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 JKAMPQ9P055 326 aa6.9□□□□□ -1.3
TDP1-204ENST00000545686 GAGE12BA1L429 117 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 D6R8Y8 96 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 H3BRM9 83 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 HBDP02042 147 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 IFI27P40305 119 aaPredicted RBP6.9□□□□□ -1.31
TDP1-204ENST00000545686 HSD52Q0P140 79 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 GTF2H5Q6ZYL4 71 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 ERASQ7Z444 233 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 RPEQ96AT9 228 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 PRELID3AQ96N28 172 aa6.9□□□□□ -1.31
TDP1-204ENST00000545686 ZFHX4Q86UP3 3567 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 TMEM189A5PLL7 270 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 PRRG2O14669 202 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 OR4X2Q8NGF9 303 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 C17orf77Q96MU5 243 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 VPS25Q9BRG1 176 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 ABCA1O95477 2261 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 C9orf118A6NHY6 69 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 LY6LH3BQJ8 138 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 SMAD7O15105 426 aaKnown RBP6.89□□□□□ -1.31
TDP1-204ENST00000545686 NHLH1Q02575 133 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 PAX8Q06710 450 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 UFSP1Q6NVU6 142 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 OR8A1Q8NGG7 326 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 TIMM8BQ9Y5J9 83 aaPredicted RBP6.89□□□□□ -1.31
TDP1-204ENST00000545686 BDP1A6H8Y1 2624 aa6.89□□□□□ -1.31
TDP1-204ENST00000545686 IL4P05112 153 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 SRSF2Q01130 221 aaKnown RBP6.88□□□□□ -1.31
TDP1-204ENST00000545686 LYZL1Q6UWQ5 148 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 PIP4P2Q8N4L2 257 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 PIFOQ8TCI5 191 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 AP1S3Q96PC3 154 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 COL25A1Q9BXS0 654 aaPredicted RBP6.88□□□□□ -1.31
TDP1-204ENST00000545686 RABAC1Q9UI14 185 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 A1L4Q6 167 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 GAGE10A6NGK3 116 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 SHISA9B4DS77 424 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 SH2D1AO60880 128 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 CNIH1O95406 144 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 C8orf49Q96NF6 230 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 TPPP3Q9BW30 176 aa6.88□□□□□ -1.31
TDP1-204ENST00000545686 RP1L1Q8IWN7 2480 aaPredicted RBP6.88□□□□□ -1.31
TDP1-204ENST00000545686 PKDREJQ9NTG1 2253 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 ROS1P08922 2347 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 E7EQL1 145 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 FAM106CPP0CH98 169 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 CEACAM3P40198 252 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 CACNG7P62955 275 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 LOXL1Q08397 574 aaPredicted RBP6.87□□□□□ -1.31
TDP1-204ENST00000545686 LINC01559Q495D7 138 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 FAM106AQ4KMX7 169 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
TDP1-204ENST00000545686 AMN1Q8IY45 258 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 CFAP47Q6ZTR5 3102 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 TMEM213A2RRL7 107 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 B9A039 149 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 M0R3E3 92 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 NBR2O15453 112 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 NDUFA3O95167 84 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 FCGR2BP31994 310 aaPredicted RBP6.87□□□□□ -1.31
TDP1-204ENST00000545686 NPBQ8NG41 125 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 IGFBPL1Q8WX77 278 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
TDP1-204ENST00000545686 OTOGLQ3ZCN5 2332 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 PPIAL4CA0A0B4J2A2 164 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 LOC389332A0A1B0GUA5 103 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 NPIPB5A8MRT5 1133 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 K7EP34 96 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 GNG7O60262 68 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 PPIAL4GP0DN37 164 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
TDP1-204ENST00000545686 COX7A1P24310 79 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 BMI1P35226 326 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 MFAP4P55083 255 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 ADAMTSL5Q6ZMM2 481 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 IGLV11-55A0A075B6I3 123 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 TIMM23O14925 209 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 S100A7P31151 101 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 CKS2P33552 79 aa6.86□□□□□ -1.31
TDP1-204ENST00000545686 FOXE3Q13461 319 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms