RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639		K7EIL1	84 aa		0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	AIP	O00170	330 aa		0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	PPY	P01298	95 aa		0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	ARPP19	P56211	112 aa		0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	GNG5	P63218	68 aa		0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	SPATA45	Q537H7	98 aa		0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	TMEM14EP	Q6UXP3	125 aa		0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	ZNF714	Q96N38	554 aa		0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	CACYBP	Q9HB71	228 aa	Known RBP	0.4	□□□□□ -2.35
RAP1B-231	ENST00000544639	CAMSAP1	Q5T5Y3	1602 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639		G3V2T6	193 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	CXCL1	P09341	107 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	TMBIM6	P55061	237 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	SCGB2B2	Q4G0G5	96 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	DHRS4L2	Q6PKH6	230 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	PXT1	Q8NFP0	134 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	OR10AC1	Q8NH08	325 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	CHMP6	Q96FZ7	201 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	OR2J1	Q9GZK6	312 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	ASB4	Q9Y574	426 aa		0.39	□□□□□ -2.35
RAP1B-231	ENST00000544639	NAV2	Q8IVL1	2488 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639		H7C1C5	153 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	LCN6	P62502	163 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	KLRD1	Q13241	179 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	PPTC7	Q8NI37	304 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	CEP19	Q96LK0	163 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	SMR3A	Q99954	134 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	PAIP2	Q9BPZ3	127 aa	Known RBP	0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	NIT2	Q9NQR4	276 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	COL24A1	Q17RW2	1714 aa		0.38	□□□□□ -2.35
RAP1B-231	ENST00000544639	NUP210L	Q5VU65	1888 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	KNTC1	P50748	2209 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	hDV103S1	A0JD37	113 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	ATG12	O94817	140 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	TRGC2	P03986	189 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	PHB	P35232	272 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	FOXA3	P55318	350 aa	Predicted RBP	0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	AKR1C8P	Q5T2L2	129 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	LRRC18	Q8N456	261 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	GPX7	Q96SL4	187 aa	Predicted RBP	0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	SH3BGRL3	Q9H299	93 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	HSPB8	Q9UJY1	196 aa		0.37	□□□□□ -2.35
RAP1B-231	ENST00000544639	TRAV23DV6	A0A075B6W5	121 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	RIIAD1	A6NNX1	92 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639		K7ERJ3	54 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	ATP5H	O75947	161 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	IFNA14	P01570	189 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	OGN	P20774	298 aa	Known RBP	0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	VBP1	P61758	197 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	ARF6	P62330	175 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	EIF3I	Q13347	325 aa	Known RBP	0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	CIRBP	Q14011	172 aa	Known RBP	0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	HACD4	Q5VWC8	232 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	IFT20	Q8IY31	132 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	ATOH7	Q8N100	152 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	LYRM2	Q9NU23	88 aa	Predicted RBP	0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	SSR3	Q9UNL2	185 aa		0.36	□□□□□ -2.35
RAP1B-231	ENST00000544639	TRAV5	A0A0B4J249	113 aa		0.35	□□□□□ -2.35
RAP1B-231	ENST00000544639	C9orf170	A2RU37	121 aa		0.35	□□□□□ -2.35
RAP1B-231	ENST00000544639	RER1	O15258	196 aa		0.35	□□□□□ -2.35
RAP1B-231	ENST00000544639	IFNA4	P05014	189 aa		0.35	□□□□□ -2.35
RAP1B-231	ENST00000544639	CD14	P08571	375 aa		0.35	□□□□□ -2.35
RAP1B-231	ENST00000544639	MSMO1	Q15800	293 aa		0.35	□□□□□ -2.35
RAP1B-231	ENST00000544639	UHRF1BP1	Q6BDS2	1440 aa		0.35	□□□□□ -2.35
RAP1B-231	ENST00000544639	ODAM	A1E959	279 aa		0.34	□□□□□ -2.36
RAP1B-231	ENST00000544639	C5orf67	F2Z3F1	127 aa		0.34	□□□□□ -2.36
RAP1B-231	ENST00000544639	APOA2	P02652	100 aa		0.34	□□□□□ -2.36
RAP1B-231	ENST00000544639	SNCB	Q16143	134 aa		0.34	□□□□□ -2.36
RAP1B-231	ENST00000544639	MAP1LC3B	Q9GZQ8	125 aa		0.34	□□□□□ -2.36
RAP1B-231	ENST00000544639	SS18L2	Q9UHA2	77 aa		0.34	□□□□□ -2.36
RAP1B-231	ENST00000544639	KMT2D	O14686	5537 aa		0.34	□□□□□ -2.36
RAP1B-231	ENST00000544639	BCL9	O00512	1426 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	TRBV30	A0A0K0K1B3	111 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	HIST1H2BK	O60814	126 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	HIST1H2BJ	P06899	126 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	FXYD4	P59646	89 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	C1orf140	Q5VVS0	124 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	GINS3	Q9BRX5	216 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	PBDC1	Q9BVG4	233 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	PLAC8	Q9NZF1	115 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	TRPM1	Q7Z4N2	1603 aa		0.33	□□□□□ -2.36
RAP1B-231	ENST00000544639	MYH2	Q9UKX2	1941 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	N4BP2	Q86UW6	1770 aa	Predicted RBP	0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	ERBIN	Q96RT1	1412 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	NUPR2	A6NF83	97 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	LYRM1	O43325	122 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	IFNA1	P01562	189 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	IGHV3-33	P01772	117 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	KRTAP2-3	P0C7H8	128 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	IDO1	P14902	403 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	MRPS15	P82914	257 aa	Known RBP	0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	MIR22HG	Q0VDD5	57 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	FOXI2	Q6ZQN5	318 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	PHF5A	Q7RTV0	110 aa	Known RBP	0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	NUP35	Q8NFH5	326 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	MALSU1	Q96EH3	234 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	KRTAP2-4	Q9BYR9	128 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	KRTAP2-1	Q9BYU5	128 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	RNF11	Q9Y3C5	154 aa		0.32	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms