RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	POU2AF1	Q16633	256 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR2B11	Q5JQS5	317 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	C22orf42	Q6IC83	251 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	CNIH2	Q6PI25	160 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	AHSA2	Q719I0	299 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	GDPD1	Q8N9F7	314 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	UBAC2	Q8NBM4	344 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR1L8	Q8NGR8	309 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	SUN5	Q8TC36	379 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	GINS3	Q9BRX5	216 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	SLIRP	Q9GZT3	109 aa	Known RBP	4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	NXF2	Q9GZY0	626 aa	Known RBP	4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	MS4A6A	Q9H2W1	248 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585		V9GY05	133 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGHV3OR16-8	A0A075B7F1	116 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	TEX50	A0A1B0GTY4	177 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	TMEM189	A5PLL7	270 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	TSPAN13	O95857	204 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	PTTG1	O95997	202 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	GIG44	P09565	113 aa	Predicted RBP	4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	HIST1H1D	P16402	221 aa	Known RBP	4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	TBP	P20226	339 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	NFYA	P23511	347 aa	Predicted RBP	4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	NUP62	P37198	522 aa	Predicted RBP	4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	EIF2B2	P49770	351 aa	Known RBP	4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	CLDN12	P56749	244 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	DEFA1	P59665	94 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	DEFA3	P59666	94 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	LSM3	P62310	102 aa	Known RBP	4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	RAB11A	P62491	216 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	CATR1	Q13166	79 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	TRAM1	Q15629	374 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	SPAG16	Q8N0X2	631 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR10W1	Q8NGF6	305 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	MARCH1	Q8TCQ1	289 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	MAFIP	Q8WZ33	124 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	TMEM56	Q96MV1	263 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	MND1	Q9BWT6	205 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	VSIR	Q9H7M9	311 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	FKBP11	Q9NYL4	201 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	TAS2R8	Q9NYW2	309 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	F11R	Q9Y624	299 aa	Known RBP	4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	FAT2	Q9NYQ8	4349 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	DNAH6	Q9C0G6	4158 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	DNAH2	Q9P225	4427 aa		4.24	□□□□□ -1.73
CPSF7-222	ENST00000544585	AGRN	O00468	2067 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGHV1OR15-1	A0A075B7D0	117 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGHV3OR16-13	A0A075B7E8	117 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGKV1D-8	A0A087WSZ0	117 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGHV3-49	A0A0A0MS15	119 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGHV3-21	A0A0B4J1V1	117 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGHV3-74	A0A0B4J1X5	117 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	TRAV3	A0A0B4J244	114 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGKV1D-13	A0A0B4J2D9	117 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	SMIM9	A6NGZ8	99 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585		K7EIM0	57 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	MFNG	O00587	321 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	APOA1	P02647	267 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGKV1-13	P0DP09	117 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	S100A1	P23297	94 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	NPPC	P23582	126 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	PSMA1	P25786	263 aa	Known RBP	4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	ETV6	P41212	452 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	WT1-AS	Q06250	92 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	PRR4	Q16378	134 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	CDNF	Q49AH0	187 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	ZNF767P	Q75MW2	155 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	LINC00469	Q8N7U9	141 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR1P1	Q8NH06	330 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	LSM10	Q969L4	123 aa	Known RBP	4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	ZNF414	Q96IQ9	312 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	HIST1H4G	Q99525	98 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	CCDC32	Q9BV29	185 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR51M1	Q9H341	326 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	NDUFA4L2	Q9NRX3	87 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	RABAC1	Q9UI14	185 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	CELA1	Q9UNI1	258 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	PKHD1	P08F94	4074 aa		4.23	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGLV8-61	A0A075B6I0	122 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	LOC105371267	A0A1B0GV96	52 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	PDCD5	O14737	125 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	GNG7	O60262	68 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	SNAPC5	O75971	98 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	INAFM2	P0DMQ5	153 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	AP2S1	P53680	142 aa	Predicted RBP	4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	IFITM3	Q01628	133 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	HACD4	Q5VWC8	232 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	TOMM20L	Q6UXN7	152 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	TMEM91	Q6ZNR0	172 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	AKAP14	Q86UN6	197 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	C6orf223	Q8N319	242 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	CCDC71L	Q8N9Z2	235 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	C15orf53	Q8NAA6	179 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	TMEM203	Q969S6	136 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	SLC25A46	Q96AG3	418 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	MGLL	Q99685	303 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	HINT2	Q9BX68	163 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	CCL28	Q9NRJ3	127 aa		4.22	□□□□□ -1.73
CPSF7-222	ENST00000544585	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.21	□□□□□ -1.74
CPSF7-222	ENST00000544585		A0A0G2JRQ6	117 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms