RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 CDK2AP2O75956 126 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 ATP5G1P05496 136 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 ATP5G3P48201 142 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 DLK1P80370 383 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 HIST1H1AQ02539 215 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 CCDC190Q86UF4 302 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 C6orf223Q8N319 242 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 C16orf74Q96GX8 76 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 PSENENQ9NZ42 101 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
SEMA4D-224ENST00000544513 SMCO3A2RU48 225 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 SSSCA1O60232 199 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 CCNKO75909 580 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 NUDT3O95989 172 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 OR5G3P0C626 314 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 CCL18P55774 89 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 RHOBP62745 196 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 C4orf46Q504U0 113 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 ZNF493Q6ZR52 646 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 S100A7AQ86SG5 101 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 RNASE8Q8TDE3 154 aaKnown RBP9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 RNF141Q8WVD5 230 aa9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 RPUSD4Q96CM3 377 aaKnown RBP9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
SEMA4D-224ENST00000544513 C16orf90A8MZG2 172 aa9.67□□□□□ -0.86
SEMA4D-224ENST00000544513 NDUFB6O95139 128 aa9.67□□□□□ -0.86
SEMA4D-224ENST00000544513 CXCL2P19875 107 aa9.67□□□□□ -0.86
SEMA4D-224ENST00000544513 CDKN1BP46527 198 aa9.67□□□□□ -0.86
SEMA4D-224ENST00000544513 PXDC1Q5TGL8 231 aa9.67□□□□□ -0.86
SEMA4D-224ENST00000544513 TMEM263Q8WUH6 116 aaKnown RBP9.67□□□□□ -0.86
SEMA4D-224ENST00000544513 ARL6Q9H0F7 186 aa9.67□□□□□ -0.86
SEMA4D-224ENST00000544513 NPVFQ9HCQ7 196 aa9.67□□□□□ -0.86
SEMA4D-224ENST00000544513 TAS2R30P59541 319 aa9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 RRAS2P62070 204 aaPredicted RBP9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 TEPPQ6URK8 271 aa9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 C20orf144Q9BQM9 153 aa9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 ARV1Q9H2C2 271 aa9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 NOP10Q9NPE3 64 aaKnown RBP9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 ZNF331Q9NQX6 463 aaPredicted RBP9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 PPP1R14DQ9NXH3 145 aa9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 RNF24Q9Y225 148 aa9.66□□□□□ -0.86
SEMA4D-224ENST00000544513 H7BYZ3 331 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 METTL15P1P0C7V9 234 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 PRB4P10163 310 aaPredicted RBP9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 HTN1P15515 57 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 S100A5P33763 92 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 KIR3DS1Q14943 382 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 LCN15Q6UWW0 184 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 SSX7Q7RTT5 188 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 ZBTB8BQ8NAP8 495 aaPredicted RBP9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 LRRC20Q8TCA0 184 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 ZNF503Q96F45 646 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 SRRQ9GZT4 340 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 FLVCR2Q9UPI3 526 aa9.65□□□□□ -0.86
SEMA4D-224ENST00000544513 NAP1L6A6NFF2 107 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 PRAC2D3DTV9 90 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 TSC22D2O75157 780 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 OR4E1P0C645 316 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 ANXA7P20073 488 aaKnown RBP9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 ARL16Q0P5N6 197 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 CNPY1Q3B7I2 92 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 LINC00305Q7Z4B0 112 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 ZNF546Q86UE3 836 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 OR10P1Q8NGE3 313 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 SLC50A1Q9BRV3 221 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 GGACTQ9BVM4 153 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 KRTAP1-5Q9BYS1 174 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 Q9H8V8 135 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 MGAT4CQ9UBM8 478 aa9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 RCL1Q9Y2P8 373 aaKnown RBP9.64□□□□□ -0.87
SEMA4D-224ENST00000544513 AGPAT2O15120 278 aa9.63□□□□□ -0.87
SEMA4D-224ENST00000544513 IGLC2P0DOY2 106 aa9.63□□□□□ -0.87
SEMA4D-224ENST00000544513 CLINT1Q14677 625 aa9.63□□□□□ -0.87
SEMA4D-224ENST00000544513 BAK1Q16611 211 aa9.63□□□□□ -0.87
SEMA4D-224ENST00000544513 GFI1BQ5VTD9 330 aa9.63□□□□□ -0.87
SEMA4D-224ENST00000544513 OR10J6PQ8NGY7 276 aa9.63□□□□□ -0.87
SEMA4D-224ENST00000544513 TMEM37Q8WXS4 190 aa9.63□□□□□ -0.87
SEMA4D-224ENST00000544513 PTTG2Q9NZH5 202 aa9.63□□□□□ -0.87
SEMA4D-224ENST00000544513 TRAV26-1A0A087WT03 109 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 C7orf66A4D0T2 115 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 SLC17A3O00476 420 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 GOSR2O14653 212 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 M6PRP20645 277 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 HOXA5P20719 270 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 BTCP35070 178 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 IAH1Q2TAA2 248 aaPredicted RBP9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 SPANXN2Q5MJ10 180 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 MORN5Q5VZ52 161 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 BPIFA4PQ86YQ2 179 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 RXFP4Q8TDU9 374 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 GNPNAT1Q96EK6 184 aaPredicted RBP9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 SAT2Q96F10 170 aaPredicted RBP9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 MGST2Q99735 147 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 UPK3BQ9BT76 320 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 Q9H3A6 140 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 HERC1Q15751 4861 aa9.62□□□□□ -0.87
SEMA4D-224ENST00000544513 H3BNG1 76 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms