RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 FAM240AA0A1B0GVK7 77 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 KBTBD11O94819 623 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 SPART-AS1P0CW21 52 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 HIST1H1EP10412 219 aaKnown RBP3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 DEFA4P12838 97 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 HOXB6P17509 224 aaKnown RBP3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 FUSP35637 526 aaKnown RBP eCLIP3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 RPL27AP46776 148 aaKnown RBP3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 SULT1A1P50225 295 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 SULT1A2P50226 295 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 KRTAP10-1P60331 282 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 CYCSP99999 105 aaKnown RBP3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 ZNF726P1Q15940 193 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 PXDC1Q5TGL8 231 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 NFE4Q86UQ8 179 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 SLC51BQ86UW2 128 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 HOGA1Q86XE5 327 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 LGI3Q8N145 548 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 NANOGP1Q8N7R0 232 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 RASL10AQ92737 203 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 C11orf52Q96A22 123 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 MRPL48Q96GC5 212 aaKnown RBP3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 ZNF486Q96H40 463 aaPredicted RBP3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 BTF3L4Q96K17 158 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 OR51E2Q9H255 320 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 DIABLOQ9NR28 239 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 IMPAD1Q9NX62 359 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 AK3Q9UIJ7 227 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 V9GY05 133 aa3.37□□□□□ -1.87
NPIPB4-219ENST00000543660 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 MUC2Q02817 5179 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 IGHV3OR16-13A0A075B7E8 117 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 IGHV3-74A0A0B4J1X5 117 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 IGLC7A0M8Q6 106 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 SLC22A5O76082 557 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 SNAPINO95295 136 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 CT45A10P0DMU9 189 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 PFN2P35080 140 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 RPS11P62280 158 aaKnown RBP eCLIP3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 RPL32P62910 135 aaKnown RBP3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 KIAA1644Q3SXP7 199 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 OR10K2Q6IF99 312 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 RPL22L1Q6P5R6 122 aaKnown RBP3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 SPSB3Q6PJ21 355 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 CBLN2Q8IUK8 224 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 TMEM167AQ8TBQ9 72 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 VN1R17PQ8TDU5 208 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 OR10C1Q96KK4 312 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 SDHCQ99643 169 aaPredicted RBP3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 TM2D1Q9BX74 207 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 GABARAPL3Q9BY60 117 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 MS4A6AQ9H2W1 248 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 MAP1LC3AQ9H492 121 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
NPIPB4-219ENST00000543660 TRBV6-7A0A0A0MS04 114 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 TRAV14DV4A0A0A6YYC5 116 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 TRAV2A0A0B4J234 112 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 TRAV8-4A0A0B4J246 113 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 TCRBV3S1A0A5B6 114 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 KNCNA6PVL3 124 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 G3V2T6 193 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 TAAR5O14804 337 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 SOCS1O15524 211 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 P01737 135 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 CTSGP08311 255 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 HTN3P15516 51 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 MYL12AP19105 171 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 GPX4P36969 197 aaPredicted RBP3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 SERPINB10P48595 397 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 EMP1P54849 157 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 OR10A3P58181 314 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 SPCS3P61009 180 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 RPL30P62888 115 aaKnown RBP3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 ARFRP1Q13795 201 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 SMCO1Q147U7 214 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 Q499Y3 187 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 CCDC58Q4VC31 144 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 FAM222AQ5U5X8 452 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 CNIH2Q6PI25 160 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 ZNF705AQ6ZN79 300 aaPredicted RBP3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 TCF24Q7RTU0 167 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 FAM19A1Q7Z5A9 133 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 LRRTM1Q86UE6 522 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 STPG4Q8N801 248 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 C15orf53Q8NAA6 179 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 VSTM2AQ8TAG5 236 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 QTRT1Q9BXR0 403 aaKnown RBP3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 GABARAPL1Q9H0R8 117 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 VSIRQ9H7M9 311 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 C12orf4Q9NQ89 552 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 CKLFQ9UBR5 152 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 LINC00588Q9Y4M8 146 aa3.35□□□□□ -1.87
NPIPB4-219ENST00000543660 IGHV3-21A0A0B4J1V1 117 aa3.34□□□□□ -1.87
NPIPB4-219ENST00000543660 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
NPIPB4-219ENST00000543660 TMEM189A5PLL7 270 aa3.34□□□□□ -1.87
NPIPB4-219ENST00000543660 FOXI3A8MTJ6 420 aaPredicted RBP3.34□□□□□ -1.87
NPIPB4-219ENST00000543660 ZNF705FA8MVS1 300 aaPredicted RBP3.34□□□□□ -1.87
NPIPB4-219ENST00000543660 K7EIM0 57 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms