RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 RNASE1P07998 156 aaKnown RBP11.22□□□□□ -0.61
RPS6KC1-206ENST00000543354 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
RPS6KC1-206ENST00000543354 LYPD2Q6UXB3 125 aa11.22□□□□□ -0.61
RPS6KC1-206ENST00000543354 ZNF329Q86UD4 541 aa11.22□□□□□ -0.61
RPS6KC1-206ENST00000543354 USP9YO00507 2555 aaPredicted RBP11.22□□□□□ -0.61
RPS6KC1-206ENST00000543354 A0A1W2PPI3 338 aa11.22□□□□□ -0.61
RPS6KC1-206ENST00000543354 NUP210Q8TEM1 1887 aaPredicted RBP11.21□□□□□ -0.61
RPS6KC1-206ENST00000543354 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
RPS6KC1-206ENST00000543354 CEACAM4O75871 244 aa11.21□□□□□ -0.61
RPS6KC1-206ENST00000543354 ASIPP42127 132 aa11.21□□□□□ -0.61
RPS6KC1-206ENST00000543354 TMEM167AQ8TBQ9 72 aa11.21□□□□□ -0.61
RPS6KC1-206ENST00000543354 SSC4DQ8WTU2 575 aa11.21□□□□□ -0.61
RPS6KC1-206ENST00000543354 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.61
RPS6KC1-206ENST00000543354 TDGF1P13385 188 aa11.21□□□□□ -0.62
RPS6KC1-206ENST00000543354 RHOGP84095 191 aa11.21□□□□□ -0.62
RPS6KC1-206ENST00000543354 KLRD1Q13241 179 aa11.21□□□□□ -0.62
RPS6KC1-206ENST00000543354 PSG3Q16557 428 aa11.21□□□□□ -0.62
RPS6KC1-206ENST00000543354 EEF1AKMT3Q96AZ1 226 aa11.21□□□□□ -0.62
RPS6KC1-206ENST00000543354 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.62
RPS6KC1-206ENST00000543354 SLC25A15Q9Y619 301 aa11.21□□□□□ -0.62
RPS6KC1-206ENST00000543354 RPRMLQ8N4K4 120 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 USP9XQ93008 2570 aaPredicted RBP11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 GAGE13Q4V321 117 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 CD5LO43866 347 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 SNCGO76070 127 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 MEIG1Q5JSS6 88 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 TEX43Q6ZNM6 134 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 MRAP2Q96G30 205 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 CEACAM8P31997 349 aaPredicted RBP11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 RAB9AP51151 201 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 DYNLRB2Q8TF09 96 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
RPS6KC1-206ENST00000543354 HIVEP3Q5T1R4 2406 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 IGHV1-8P0DP01 117 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 ERVK11-1P61568 191 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 GAFA1Q96PS6 74 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 PLSCR4Q9NRQ2 329 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 HIVEP2P31629 2446 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 IGHV2-26A0A0B4J1V2 119 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 SRRM4A7MD48 611 aaKnown RBP11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 CNTFRP26992 372 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 COA6Q5JTJ3 125 aaKnown RBP11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 TMEM158Q8WZ71 300 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 PYGO2Q9BRQ0 406 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 CHD7Q9P2D1 2997 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 TRAV12-3A0A0B4J271 114 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 SUMO2P61956 95 aaKnown RBP11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 NDPQ00604 133 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 RASL11AQ6T310 242 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 DDB2Q92466 427 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 SPOCK3Q9BQ16 436 aa11.19□□□□□ -0.62
RPS6KC1-206ENST00000543354 HOXA3O43365 443 aaPredicted RBP11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 WT1-ASQ06250 92 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 TRAV2A0A0B4J234 112 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 IGHV4-39P01824 125 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 LMO1P25800 156 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 KLRB1Q12918 225 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 DIAPH2-AS1Q14236 149 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 TPSG1Q9NRR2 321 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 SH2D1AO60880 128 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 MDS2Q8NDY4 140 aa11.18□□□□□ -0.62
RPS6KC1-206ENST00000543354 IGHV1-3A0A0C4DH29 117 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 PPBPP02775 128 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 CD7P09564 240 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 FAM106AQ4KMX7 169 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 ZNF474Q6S9Z5 364 aaPredicted RBP11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 FAM57AQ8TBR7 257 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 SPEGQ15772 3267 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 IGHV1-24A0A0C4DH33 117 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 CCL25O15444 150 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.623e-10■■■■□ 23.6
RPS6KC1-206ENST00000543354 C15orf32Q32M92 178 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 TRGV9Q99603 122 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 RANBP2P49792 3224 aaKnown RBP11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 CD59P13987 128 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 Q86TA4 180 aa11.17□□□□□ -0.62
RPS6KC1-206ENST00000543354 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 TOMM40O96008 361 aa11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 PRTN3P24158 256 aa11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 KIR2DL5AQ8N109 375 aa11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 LINC00173Q6ZV60 143 aa11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 RNASE8Q8TDE3 154 aaKnown RBP11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 TRAV40A0A0B4J280 105 aa11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 TMEM95Q3KNT9 176 aa11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 CHTOPQ9Y3Y2 248 aaKnown RBP11.16□□□□□ -0.62
RPS6KC1-206ENST00000543354 LY6G6EA0A0G2JKS1 128 aa11.15□□□□□ -0.62
RPS6KC1-206ENST00000543354 TMEM178BH3BS89 294 aa11.15□□□□□ -0.62
RPS6KC1-206ENST00000543354 ZNF883P0CG24 379 aa11.15□□□□□ -0.62
RPS6KC1-206ENST00000543354 C1orf122Q6ZSJ8 110 aa11.15□□□□□ -0.62
RPS6KC1-206ENST00000543354 TMEM219Q86XT9 240 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms