RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 GGACTQ9BVM4 153 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 DDA1Q9BW61 102 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 OTORQ9NRC9 128 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 CDC42SE1Q9NRR8 79 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 SMPXQ9UHP9 88 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 RNF11Q9Y3C5 154 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 ASB4Q9Y574 426 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 FBN2P35556 2912 aa0.59□□□□□ -2.32
MDM2-227ENST00000540709 RIMBP3CA6NJZ7 1639 aa0.59□□□□□ -2.32
MDM2-227ENST00000540709 RIMBP3BA6NNM3 1639 aa0.59□□□□□ -2.32
MDM2-227ENST00000540709 RIMBP3Q9UFD9 1639 aa0.59□□□□□ -2.32
MDM2-227ENST00000540709 ANKRD30AQ9BXX3 1397 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 A0A096LPI6 279 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 TRBV6-7A0A0A0MS04 114 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 TRAV13-1A0A0B4J241 112 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 TRAV5A0A0B4J249 113 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 LOC107984156A0A0G2JMH3 177 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 TRDV1A0A1B0GX56 115 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 F8W1H4 67 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 H3BMG7 143 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 ERC2-IT1O76042 136 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 RPL7P18124 248 aaKnown RBP0.58□□□□□ -2.32
MDM2-227ENST00000540709 CMPK1P30085 196 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 CNBPP62633 177 aaKnown RBP0.58□□□□□ -2.32
MDM2-227ENST00000540709 MRPS36P82909 103 aaKnown RBP0.58□□□□□ -2.32
MDM2-227ENST00000540709 PDE6HQ13956 83 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 C1orf137Q5JT78 98 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 C1orf134Q5TEV5 83 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 ARL17AQ8IVW1 177 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 Q8N2B8 174 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 OR4B1Q8NGF8 309 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 BRK1Q8WUW1 75 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 THEM6Q8WUY1 208 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 MUCL1Q96DR8 90 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 HYLS1Q96M11 299 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 CCDC115Q96NT0 180 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 AP1S3Q96PC3 154 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 OR2H1Q9GZK4 316 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 C19orf12Q9NSK7 152 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 CALML5Q9NZT1 146 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 GINS2Q9Y248 185 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 TPRKBQ9Y3C4 175 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 MED31Q9Y3C7 131 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 TAF1LQ8IZX4 1826 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 CEP164Q9UPV0 1460 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 PBRM1Q86U86 1689 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 CUL9Q8IWT3 2517 aa0.58□□□□□ -2.32
MDM2-227ENST00000540709 GLI3P10071 1580 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 PCDH15Q96QU1 1955 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 SCN8AQ9UQD0 1980 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 MYO5AQ9Y4I1 1855 aaKnown RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 TRAV27A0A087WT01 109 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 A0A087WX48 190 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 IGHV1-58A0A0C4DH39 117 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 hDV103S1A0JD37 113 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 B4DSR2 109 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 ZNF736B4DX44 427 aaPredicted RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 E7EUB6 86 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 C5orf67F2Z3F1 127 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 H3BRM9 83 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 H7BYZ3 331 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 M0QZK8 103 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 GEMIN2O14893 280 aaKnown RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 DEGS1O15121 323 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 KLF7O75840 302 aaPredicted RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 CXCL8P10145 99 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 TPT1P13693 172 aaKnown RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 ZNF25P17030 456 aaPredicted RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 POLR2HP52434 150 aaKnown RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 DSCR4P56555 118 aaPredicted RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 ROMO1P60602 79 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 LSM3P62310 102 aaKnown RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 DIAPH2-AS1Q14236 149 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 TOMM20LQ6UXN7 152 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 PATE2Q6UY27 113 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 PHF5AQ7RTV0 110 aaKnown RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 PRR15Q8IV56 129 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 Q8N814 137 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 TMEM229BQ8NBD8 167 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 PRELID3AQ96N28 172 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 MCEEQ96PE7 176 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 OR4C12Q96R67 309 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 MRPL57Q9BQC6 102 aaKnown RBP0.57□□□□□ -2.32
MDM2-227ENST00000540709 LRTM1Q9HBL6 345 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 TMEM138Q9NPI0 162 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 NIT2Q9NQR4 276 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 SPANXA1Q9NS26 97 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 ORMDL1Q9P0S3 153 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 TMEM14CQ9P0S9 112 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 MICAL3Q7RTP6 2002 aa0.57□□□□□ -2.32
MDM2-227ENST00000540709 OBSL1O75147 1896 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 TECPR2O15040 1411 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 DLG5Q8TDM6 1919 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 ANAPC1Q9H1A4 1944 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 CAMSAP2Q08AD1 1489 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 ARHGEF28Q8N1W1 1705 aaKnown RBP0.56□□□□□ -2.32
MDM2-227ENST00000540709 DOCK4Q8N1I0 1966 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 TRAV23DV6A0A075B6W5 121 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms