RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RLN2P04090 185 aa8.68□□□□□ -1.02
COPS7A-211ENST00000540408 LINC00869P0C866 280 aa8.68□□□□□ -1.02
COPS7A-211ENST00000540408 ACOT7LQ6ZUV0 252 aa8.68□□□□□ -1.02
COPS7A-211ENST00000540408 RNASE8Q8TDE3 154 aaKnown RBP8.68□□□□□ -1.02
COPS7A-211ENST00000540408 RPUSD4Q96CM3 377 aaKnown RBP8.68□□□□□ -1.02
COPS7A-211ENST00000540408 UHRF2Q96PU4 802 aa8.68□□□□□ -1.02
COPS7A-211ENST00000540408 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
COPS7A-211ENST00000540408 PTTG2Q9NZH5 202 aa8.68□□□□□ -1.02
COPS7A-211ENST00000540408 A0A0J9YY99 117 aa8.67□□□□□ -1.02
COPS7A-211ENST00000540408 SNURFLB1AK76 121 aa8.67□□□□□ -1.02
COPS7A-211ENST00000540408 H3BP45 60 aa8.67□□□□□ -1.02
COPS7A-211ENST00000540408 HOXB5P09067 269 aa8.67□□□□□ -1.02
COPS7A-211ENST00000540408 SLC25A21Q9BQT8 299 aaPredicted RBP8.67□□□□□ -1.02
COPS7A-211ENST00000540408 CCDC59Q9P031 241 aaKnown RBP8.67□□□□□ -1.02
COPS7A-211ENST00000540408 GAGE12BA1L429 117 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 H3BNG1 76 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 ZNF701M0R085 212 aaPredicted RBP8.66□□□□□ -1.02
COPS7A-211ENST00000540408 EREGO14944 169 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 GAGE7O76087 117 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 SFT2D2O95562 160 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 GAGE12FP0CL80 117 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 GAGE12GP0CL81 117 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 GAGE12IP0CL82 117 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 CXCL2P19875 107 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 PLP1P60201 277 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 DLK1P80370 383 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 ESRGQ1W209 222 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 LCN15Q6UWW0 184 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 TOMM5Q8N4H5 51 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 RAB2BQ8WUD1 216 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 MRPS26Q9BYN8 205 aaKnown RBP8.66□□□□□ -1.02
COPS7A-211ENST00000540408 ARL6Q9H0F7 186 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 NPVFQ9HCQ7 196 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 PSENENQ9NZ42 101 aa8.66□□□□□ -1.02
COPS7A-211ENST00000540408 PMS2P5A8MQ11 134 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 SMIM18P0DKX4 95 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 TNFSF8P32971 234 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 KRTAP10-2P60368 255 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 CCDC190Q86UF4 302 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 DYNC2LI1Q8TCX1 351 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 ARV1Q9H2C2 271 aa8.65□□□□□ -1.02
COPS7A-211ENST00000540408 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
COPS7A-211ENST00000540408 GOSR2O14653 212 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 POLR2GP62487 172 aaKnown RBP eCLIP8.64□□□□□ -1.03
COPS7A-211ENST00000540408 ID3Q02535 119 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 PPP1R1AQ13522 171 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 PYDC2Q56P42 97 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 TEPPQ6URK8 271 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 BPIFA4PQ86YQ2 179 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 LINC00612Q8N6U2 182 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 MCFD2Q8NI22 146 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 BCL7BQ9BQE9 202 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 KRTAP1-5Q9BYS1 174 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 ZNF331Q9NQX6 463 aaPredicted RBP8.64□□□□□ -1.03
COPS7A-211ENST00000540408 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 ZNF586Q9NXT0 402 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 MGAT4CQ9UBM8 478 aa8.64□□□□□ -1.03
COPS7A-211ENST00000540408 FNDC10F2Z333 226 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 NOL3O60936 208 aaKnown RBP8.63□□□□□ -1.03
COPS7A-211ENST00000540408 HOXA5P20719 270 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 TMBIM6P55061 237 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 RRAS2P62070 204 aaPredicted RBP8.63□□□□□ -1.03
COPS7A-211ENST00000540408 GFI1BQ5VTD9 330 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 OR10P1Q8NGE3 313 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 DEDD2Q8WXF8 326 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 SMIM8Q96KF7 97 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 SOSTQ9BQB4 213 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
COPS7A-211ENST00000540408 TRGV2A0A075B6R0 118 aa8.62□□□□□ -1.03
COPS7A-211ENST00000540408 SSSCA1O60232 199 aa8.62□□□□□ -1.03
COPS7A-211ENST00000540408 PRB4P10163 310 aaPredicted RBP8.62□□□□□ -1.03
COPS7A-211ENST00000540408 LEPP41159 167 aa8.62□□□□□ -1.03
COPS7A-211ENST00000540408 PATE2Q6UY27 113 aa8.62□□□□□ -1.03
COPS7A-211ENST00000540408 ZNF546Q86UE3 836 aa8.62□□□□□ -1.03
COPS7A-211ENST00000540408 PYGO2Q9BRQ0 406 aa8.62□□□□□ -1.03
COPS7A-211ENST00000540408 PXMP4Q9Y6I8 212 aa8.62□□□□□ -1.03
COPS7A-211ENST00000540408 TRAV12-3A0A0B4J271 114 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 J3KRW8 73 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 K7EPK0 472 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 MRPS12O15235 138 aaKnown RBP8.61□□□□□ -1.03
COPS7A-211ENST00000540408 SIVA1O15304 175 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 COX7A2P2O60397 106 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 INAFM2P0DMQ5 153 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 LINC00315P59091 139 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 UBE2MP61081 183 aaKnown RBP8.61□□□□□ -1.03
COPS7A-211ENST00000540408 DAZ2Q13117 558 aaKnown RBP8.61□□□□□ -1.03
COPS7A-211ENST00000540408 KIR3DS1Q14943 382 aa8.61□□□□□ -1.03
COPS7A-211ENST00000540408 SLIRPQ9GZT3 109 aaKnown RBP8.61□□□□□ -1.03
COPS7A-211ENST00000540408 IFNA5P01569 189 aa8.6□□□□□ -1.03
COPS7A-211ENST00000540408 SNRPCP09234 159 aaKnown RBP8.6□□□□□ -1.03
COPS7A-211ENST00000540408 ERVFC1-1P60608 527 aa8.6□□□□□ -1.03
COPS7A-211ENST00000540408 SLC38A11Q08AI6 406 aa8.6□□□□□ -1.03
COPS7A-211ENST00000540408 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
COPS7A-211ENST00000540408 TRIM63Q969Q1 353 aa8.6□□□□□ -1.03
COPS7A-211ENST00000540408 PARD6GQ9BYG4 376 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms