RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 TRAV8-1A0A0A6YYK1 113 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 TRAV17A0A0B4J275 112 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 LOC107984640A0A0U1RRK4 108 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 MBD3L4A6NDZ8 208 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-211ENST00000539921 MBD3L3A6NE82 208 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-211ENST00000539921 MBD3L5A6NJ08 208 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-211ENST00000539921 C15orf61A6NNL5 157 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 TMEM150CB9EJG8 249 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 SNRNP200O75643 2136 aaKnown RBP4.86□□□□□ -1.63
SNHG1-211ENST00000539921 TRACP01848 142 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 IFI27P40305 119 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-211ENST00000539921 PPP1CAP62136 330 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 GNG5P63218 68 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 SRSF2Q01130 221 aaKnown RBP4.86□□□□□ -1.63
SNHG1-211ENST00000539921 KLRB1Q12918 225 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 ANXA2RQ3ZCQ2 193 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 C2orf83Q53S99 150 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 C6orf226Q5I0X4 101 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 Q5XG85 94 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 Q6ZQT7 251 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 COX8CQ7Z4L0 72 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 PRIMA1Q86XR5 153 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 SSMEM1Q8WWF3 244 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 COPS9Q8WXC6 57 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 GPHA2Q96T91 129 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 PAXXQ9BUH6 204 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 MCRIP2Q9BUT9 160 aaKnown RBP4.86□□□□□ -1.63
SNHG1-211ENST00000539921 AAMDCQ9H7C9 122 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 EDA2RQ9HAV5 297 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 DKK2Q9UBU2 259 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 SIT1Q9Y3P8 196 aa4.86□□□□□ -1.63
SNHG1-211ENST00000539921 LOC107984156A0A0G2JMH3 177 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 FAM236AA0A1B0GUQ0 79 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 FAM236BA0A1B0GV22 79 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 C5orf63A6NC05 138 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 OOSP1A8MZH6 123 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 K7ESF4 209 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 ZNF415Q09FC8 603 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 PAPPA-AS1Q5QFB9 102 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 ASCL5Q7RTU5 278 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 C5orf38Q86SI9 138 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 Q86TA4 180 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 ARL17AQ8IVW1 177 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 NFAM1Q8NET5 270 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-211ENST00000539921 RNF125Q96EQ8 232 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 MMABQ96EY8 250 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-211ENST00000539921 C20orf173Q96LM9 149 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 EMC6Q9BV81 110 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 TMEM14BQ9NUH8 114 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 PRO1854Q9UHT4 67 aa4.85□□□□□ -1.63
SNHG1-211ENST00000539921 TMEM30CPA0ZSE6 113 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 RBAKDNA6NC62 111 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 PGPA6NDG6 321 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 C17orf98A8MV24 154 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 F8VRH5 84 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 J3QT63 122 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 K7EM74 188 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 NDUFC2O95298 119 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 TCRAP04437 139 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 ZNF138P52744 262 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 SUB1P53999 127 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNHG1-211ENST00000539921 BRWD1-AS2P59051 145 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 LINC01620Q4KN68 170 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 MBNL2Q5VZF2 373 aaKnown RBP4.84□□□□□ -1.63
SNHG1-211ENST00000539921 DUX4L9Q6RFH8 374 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-211ENST00000539921 AAED1Q7RTV5 226 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 FXYD5Q96DB9 178 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 C9orf85Q96MD7 179 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 FANCD2OSQ96PS1 177 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 CNFNQ9BYD5 112 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 PLA2G2FQ9BZM2 168 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 JPT2Q9H910 190 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 OTORQ9NRC9 128 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 CALYQ9NYX4 217 aa4.84□□□□□ -1.63
SNHG1-211ENST00000539921 ZNF256Q9Y2P7 627 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-211ENST00000539921 ALPK2Q86TB3 2170 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 TRGV11A0A075B6L2 103 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 TRBV30A0A0K0K1B3 111 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 A0A1W2PQU0 124 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 D6R8Y8 96 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 LY6LH3BQJ8 138 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 H7C1H1 209 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 SS18L1O75177 396 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 PRSS1P07477 247 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 ZNF137PP52743 207 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 RPS21P63220 83 aaKnown RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 CCL8P80075 99 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 MRPS36P82909 103 aaKnown RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 ZNF816Q0VGE8 651 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 LY6G5CQ5SRR4 150 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 GOLT1AQ6ZVE7 132 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 RPS19BP1Q86WX3 136 aaKnown RBP4.83□□□□□ -1.64
SNHG1-211ENST00000539921 APRG1Q8IVJ8 170 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 LYPD1Q8N2G4 141 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 TMEM86BQ8N661 226 aa4.83□□□□□ -1.64
SNHG1-211ENST00000539921 Q8N8P6 123 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms