RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 CRYGSP22914 178 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 RAB5CP51148 216 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 HIST1H1AQ02539 215 aaPredicted RBP1.45□□□□□ -2.18
SNHG1-210ENST00000539303 CDK5R1Q15078 307 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 MORN2Q502X0 79 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 TMEM244Q5VVB8 128 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 LINC00311Q8N616 119 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 SPACA4Q8TDM5 124 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 TAF9BQ9HBM6 251 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 NIT2Q9NQR4 276 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 COL4A2P08572 1712 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 TANC2Q9HCD6 1990 aa1.45□□□□□ -2.18
SNHG1-210ENST00000539303 SMARCA4P51532 1647 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 GLI3P10071 1580 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 MEIKINA0A087WXM9 373 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 TRAV14DV4A0A0A6YYC5 116 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 B4DSR2 109 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 C17orf112F2Z3M2 114 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 MPC1LP0DKB6 136 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 FOXA3P55318 350 aaPredicted RBP1.44□□□□□ -2.18
SNHG1-210ENST00000539303 MRPS36P82909 103 aaKnown RBP1.44□□□□□ -2.18
SNHG1-210ENST00000539303 CDK6Q00534 326 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 Q1T7F1 81 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 DEFB113Q30KQ7 82 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 KRTAP6-3Q3LI67 103 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 C1orf134Q5TEV5 83 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 Q5XG85 94 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 TSTD1Q8NFU3 115 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 OR5D14Q8NGL3 314 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 TMEM254Q8TBM7 123 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 MCEEQ96PE7 176 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 VPS25Q9BRG1 176 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 SMIM3Q9BZL3 60 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 PCDH15Q96QU1 1955 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 COL11A1P12107 1806 aaPredicted RBP1.44□□□□□ -2.18
SNHG1-210ENST00000539303 MED23Q9ULK4 1368 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 STRCQ7RTU9 1775 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 RP1P56715 2156 aa1.44□□□□□ -2.18
SNHG1-210ENST00000539303 CCDC171Q6TFL3 1326 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 IGKV2D-26A0A0A0MRZ7 120 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 J3QRE1 110 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 M0R2Z0 102 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 NDUFA2O43678 99 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 TPT1P13693 172 aaKnown RBP1.43□□□□□ -2.18
SNHG1-210ENST00000539303 FABP4P15090 132 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 ROMO1P60602 79 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 MAXP61244 160 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 HSD17B12Q53GQ0 312 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 KRTAP13-1Q8IUC0 172 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 CLECL1Q8IZS7 167 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 Q8N814 137 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 OR5A2Q8NGI9 324 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 NAT14Q8WUY8 206 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 SFT2D1Q8WV19 159 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 DIRC1Q969H9 104 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 RAB37Q96AX2 223 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 HYLS1Q96M11 299 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 U3KQ87 197 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 ADGRB3O60242 1522 aa1.43□□□□□ -2.18
SNHG1-210ENST00000539303 DSPPQ9NZW4 1301 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 PCNX2A6NKB5 2137 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 ARHGEF11O15085 1522 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 CDK5RAP2Q96SN8 1893 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 ZFHX2Q9C0A1 2572 aaPredicted RBP1.42□□□□□ -2.18
SNHG1-210ENST00000539303 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.42□□□□□ -2.18
SNHG1-210ENST00000539303 TRAV12-1A0A0B4J245 112 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 hDV103S1A0JD37 113 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 EFCAB10A6NFE3 127 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 C2orf70A6NJV1 201 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 J3QR89 54 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 IGLV1-51P01701 117 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 EVI2AP22794 236 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 BRS3P32247 399 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 LSM3P62310 102 aaKnown RBP1.42□□□□□ -2.18
SNHG1-210ENST00000539303 LRRC18Q8N456 261 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 MORN4Q8NDC4 146 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 OR4S1Q8NGB4 309 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 MAGOHBQ96A72 148 aaKnown RBP1.42□□□□□ -2.18
SNHG1-210ENST00000539303 MUCL1Q96DR8 90 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 BANF2Q9H503 90 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 TPT1P8Q9HAU6 139 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 FKBP11Q9NYL4 201 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 OR5AC2Q9NZP5 309 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 PAIP2BQ9ULR5 123 aaKnown RBP1.42□□□□□ -2.18
SNHG1-210ENST00000539303 TPRKBQ9Y3C4 175 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 HEATR5BQ9P2D3 2071 aa1.42□□□□□ -2.18
SNHG1-210ENST00000539303 PLXNA3P51805 1871 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 DLC1Q96QB1 1528 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 TRPM1Q7Z4N2 1603 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 FANCMQ8IYD8 2048 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 TCRBV4S1A1TA0A5B7 111 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 UQCRQO14949 82 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 SMIM24O75264 130 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 HBDP02042 147 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 TCRAP04437 139 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 SLC25A5P05141 298 aaKnown RBP1.41□□□□□ -2.18
SNHG1-210ENST00000539303 CD2P06729 351 aa1.41□□□□□ -2.18
SNHG1-210ENST00000539303 DSCR4P56555 118 aaPredicted RBP1.41□□□□□ -2.18
SNHG1-210ENST00000539303 CIRBPQ14011 172 aaKnown RBP1.41□□□□□ -2.18
SNHG1-210ENST00000539303 TMEM14EPQ6UXP3 125 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms