RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 C2orf70A6NJV1 201 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 FAM74A7A6NL05 159 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 OVOL1O14753 267 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 ZNF253O75346 499 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
VAMP1-207ENST00000539047 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 ICAM4Q14773 271 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 LYPD1Q8N2G4 141 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 GLMPQ8WWB7 406 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 RARRES2Q99969 163 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 SLC50A1Q9BRV3 221 aa11.75□□□□□ -0.53
VAMP1-207ENST00000539047 CHEK1O14757 476 aa11.74□□□□□ -0.53
VAMP1-207ENST00000539047 APOHP02749 345 aaPredicted RBP11.74□□□□□ -0.53
VAMP1-207ENST00000539047 CBLN1P23435 193 aa11.74□□□□□ -0.53
VAMP1-207ENST00000539047 RANP62826 216 aaKnown RBP11.74□□□□□ -0.53
VAMP1-207ENST00000539047 C12orf54Q6X4T0 127 aa11.74□□□□□ -0.53
VAMP1-207ENST00000539047 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
VAMP1-207ENST00000539047 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
VAMP1-207ENST00000539047 DLX4Q92988 240 aaPredicted RBP11.74□□□□□ -0.53
VAMP1-207ENST00000539047 SLC35B3Q9H1N7 401 aa11.74□□□□□ -0.53
VAMP1-207ENST00000539047 OTORQ9NRC9 128 aa11.74□□□□□ -0.53
VAMP1-207ENST00000539047 ZNF586Q9NXT0 402 aa11.74□□□□□ -0.53
VAMP1-207ENST00000539047 YTHDF2Q9Y5A9 579 aaKnown RBP11.74□□□□□ -0.53
VAMP1-207ENST00000539047 MRPS12O15235 138 aaKnown RBP11.73□□□□□ -0.53
VAMP1-207ENST00000539047 FOLR2P14207 255 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 ATP5G3P48201 142 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 CEBPGP53567 150 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 KRTAP10-3P60369 221 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 HIST2H2BDQ6DRA6 164 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 TCF24Q7RTU0 167 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 C3orf56Q8N813 242 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 CITED1Q99966 193 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 Q9H3A6 140 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 CLEC5AQ9NY25 188 aa11.73□□□□□ -0.53
VAMP1-207ENST00000539047 ADARB2-AS1A8MUL3 147 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 KRBOX1C9JBD0 128 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 TMEM250H0YL14 139 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 H3BQ15 152 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 H3BTX0 84 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 ATP6V1G1O75348 118 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
VAMP1-207ENST00000539047 SFTA3P0C7M3 94 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 CSN1S1P47710 185 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 C5orf17Q8NAS9 161 aa11.72□□□□□ -0.53
VAMP1-207ENST00000539047 K7EQM0 130 aa11.71□□□□□ -0.53
VAMP1-207ENST00000539047 SNRPCP09234 159 aaKnown RBP11.71□□□□□ -0.53
VAMP1-207ENST00000539047 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
VAMP1-207ENST00000539047 RPUSD4Q96CM3 377 aaKnown RBP11.71□□□□□ -0.53
VAMP1-207ENST00000539047 NRN1Q9NPD7 142 aa11.71□□□□□ -0.53
VAMP1-207ENST00000539047 PRELID1Q9Y255 219 aa11.71□□□□□ -0.53
VAMP1-207ENST00000539047 PGPA6NDG6 321 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 DNASE2O00115 360 aaPredicted RBP11.7□□□□□ -0.54
VAMP1-207ENST00000539047 SRP19P09132 144 aaKnown RBP11.7□□□□□ -0.54
VAMP1-207ENST00000539047 S100A1P23297 94 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 ID1P41134 155 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 CD81P60033 236 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
VAMP1-207ENST00000539047 SOHLH1Q5JUK2 328 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 RBPMS2Q6ZRY4 209 aaKnown RBP11.7□□□□□ -0.54
VAMP1-207ENST00000539047 HIST1H2BAQ96A08 127 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
VAMP1-207ENST00000539047 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
VAMP1-207ENST00000539047 TMEM218A2RU14 115 aa11.69□□□□□ -0.54
VAMP1-207ENST00000539047 F8W036 122 aa11.69□□□□□ -0.54
VAMP1-207ENST00000539047 AKR1C3P42330 323 aa11.69□□□□□ -0.54
VAMP1-207ENST00000539047 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
VAMP1-207ENST00000539047 CYB561D1Q8N8Q1 229 aa11.69□□□□□ -0.54
VAMP1-207ENST00000539047 ZNF747Q9BV97 191 aa11.69□□□□□ -0.54
VAMP1-207ENST00000539047 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
VAMP1-207ENST00000539047 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 SERTM2A0A1B0GWG4 89 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 SLC17A3O00476 420 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 PEX7O00628 323 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 NDUFB4O95168 129 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 CSN3P07498 182 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 CNN1P51911 297 aaKnown RBP11.68□□□□□ -0.54
VAMP1-207ENST00000539047 FAM74A3Q4VXF1 159 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 EXOC3-AS1Q8N2X6 119 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 C11orf52Q96A22 123 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 C17orf77Q96MU5 243 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 ATG101Q9BSB4 218 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 ZNF331Q9NQX6 463 aaPredicted RBP11.68□□□□□ -0.54
VAMP1-207ENST00000539047 SIGLEC8Q9NYZ4 499 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 MLXQ9UH92 298 aa11.68□□□□□ -0.54
VAMP1-207ENST00000539047 SCO2A0A1W2PP80 73 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 ISLRO14498 428 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 SAP30O75446 220 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 S100A9P06702 114 aaKnown RBP11.67□□□□□ -0.54
VAMP1-207ENST00000539047 EDN2P20800 178 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 ZNF674Q2M3X9 581 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 CCDC28AQ8IWP9 274 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 ARL6IP6Q8N6S5 226 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 MRPL53Q96EL3 112 aaKnown RBP11.67□□□□□ -0.54
VAMP1-207ENST00000539047 SMIM7Q9BQ49 75 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 SEC11CQ9BY50 192 aa11.67□□□□□ -0.54
VAMP1-207ENST00000539047 EPDR1Q9UM22 224 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms