RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 VGLL1Q99990 258 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 DSCAML1Q8TD84 2053 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 GAGE12HA6NDE8 117 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 SHISA9B4DS77 424 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 ARMS2P0C7Q2 107 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 CECR9P0C854 216 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 IFI27P40305 119 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-209ENST00000538654 UTF1Q5T230 341 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 ZNF833PQ6ZTB9 187 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 SRSF12Q8WXF0 261 aaKnown RBP7.2□□□□□ -1.26
SNHG1-209ENST00000538654 GTSF1LQ9H1H1 148 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 PILRBQ9UKJ0 227 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 INSIG2Q9Y5U4 225 aa7.2□□□□□ -1.26
SNHG1-209ENST00000538654 TNCP24821 2201 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 NBL1P41271 181 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 MEF2CQ06413 473 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-209ENST00000538654 SMAGPQ0VAQ4 97 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 FOXI2Q6ZQN5 318 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 C8orf46Q8TAG6 207 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 IFI27L1Q96BM0 104 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 FLYWCH2Q96CP2 140 aaKnown RBP7.19□□□□□ -1.26
SNHG1-209ENST00000538654 RPUSD1Q9UJJ7 312 aaKnown RBP7.19□□□□□ -1.26
SNHG1-209ENST00000538654 U3KQK5 164 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 A0A096LNJ9 63 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 hADV38S2A0JD32 116 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 LHBP01229 141 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 KIR2DL2P43627 348 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-209ENST00000538654 NMUP48645 174 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 WT1-ASQ06250 92 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 PRNTQ86SH4 94 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 CIARTQ8N365 385 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-209ENST00000538654 DEFB127Q9H1M4 99 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 TMEM14CQ9P0S9 112 aa7.19□□□□□ -1.26
SNHG1-209ENST00000538654 WDR87Q6ZQQ6 2873 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 PPIAL4EA0A075B759 164 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 PPIAL4FP0DN26 164 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 HOXB4P17483 251 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-209ENST00000538654 UCNP55089 124 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 ORMDL3Q8N138 153 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 OR4C13Q8NGP0 309 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 PRELID3AQ96N28 172 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 SPATA25Q9BR10 227 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 SPRR3Q9UBC9 169 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 H3BS24 57 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 OVOL3O00110 214 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 IGLV1-44P01699 117 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 LINC01620Q4KN68 170 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 CCDC144NLQ6NUI1 221 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 MTURNQ8N3F0 131 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 TMEM75Q8N9X5 138 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 MDS2Q8NDY4 140 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 SELENOKQ9Y6D0 94 aa7.18□□□□□ -1.26
SNHG1-209ENST00000538654 IGLV2-11P01706 119 aa7.17□□□□□ -1.26
SNHG1-209ENST00000538654 GCSHP23434 173 aa7.17□□□□□ -1.26
SNHG1-209ENST00000538654 TCTEX1D4Q5JR98 221 aa7.17□□□□□ -1.26
SNHG1-209ENST00000538654 GOLT1AQ6ZVE7 132 aa7.17□□□□□ -1.26
SNHG1-209ENST00000538654 BCL6BQ8N143 479 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-209ENST00000538654 HIGD1AQ9Y241 93 aa7.17□□□□□ -1.26
SNHG1-209ENST00000538654 PCNX2A6NKB5 2137 aa7.17□□□□□ -1.26
SNHG1-209ENST00000538654 PCP2Q8IVA1 136 aa7.17□□□□□ -1.26
SNHG1-209ENST00000538654 RND1Q92730 232 aa7.17□□□□□ -1.26
SNHG1-209ENST00000538654 MRPL20Q9BYC9 149 aaKnown RBP7.17□□□□□ -1.26
SNHG1-209ENST00000538654 SPANXB1Q9NS25 103 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-209ENST00000538654 LOC389332A0A1B0GUA5 103 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 D6R8Y8 96 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 MRPL36Q9P0J6 103 aaKnown RBP7.16□□□□□ -1.26
SNHG1-209ENST00000538654 TRAV8-1A0A0A6YYK1 113 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 IGHV3-48P01763 117 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 HLA-DRB4P13762 266 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 VMA21Q3ZAQ7 101 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 FAM104BQ5XKR9 115 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 PVRIGQ6DKI7 326 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 MBD3L2Q8NHZ7 208 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-209ENST00000538654 RNF7Q9UBF6 113 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 F11RQ9Y624 299 aaKnown RBP7.16□□□□□ -1.26
SNHG1-209ENST00000538654 HLA-DRB4X5D2U9 266 aa7.16□□□□□ -1.26
SNHG1-209ENST00000538654 IGHV1-18A0A0C4DH31 117 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 E7EUB6 86 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 NDUFS7O75251 213 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 FAM106CPP0CH98 169 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 CKS1BP61024 79 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 TNP2Q05952 138 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 LOXL1Q08397 574 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-209ENST00000538654 FAM106AQ4KMX7 169 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 LYPD1Q8N2G4 141 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 SMIM20Q8N5G0 67 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 CNEP1R1Q8N9A8 125 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 TM2D2Q9BX73 214 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 SPEGQ15772 3267 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 A0A0A0MQY5 61 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 A0A1W2PRD5 423 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 A0A1W2PRF3 423 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 A0A1W2PRM7 423 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 E9PLD3 99 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 NKX2-8O15522 239 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 PAX8Q06710 450 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 TAL2Q16559 108 aa7.15□□□□□ -1.26
SNHG1-209ENST00000538654 LINC00312Q9Y6C7 94 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms