RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 C5orf17Q8NAS9 161 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 WNK1Q9H4A3 2382 aa10.91□□□□□ -0.66
ACTN1-205ENST00000538545 EDN2P20800 178 aa10.9□□□□□ -0.66
ACTN1-205ENST00000538545 IER3P46695 156 aa10.9□□□□□ -0.66
ACTN1-205ENST00000538545 EEF1AKMT3Q96AZ1 226 aa10.9□□□□□ -0.66
ACTN1-205ENST00000538545 ATG101Q9BSB4 218 aa10.9□□□□□ -0.66
ACTN1-205ENST00000538545 TMEM14CQ9P0S9 112 aa10.9□□□□□ -0.66
ACTN1-205ENST00000538545 ZNF705GA8MUZ8 300 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-205ENST00000538545 CBLN1P23435 193 aa10.9□□□□□ -0.66
ACTN1-205ENST00000538545 CMTM2Q8TAZ6 248 aa10.9□□□□□ -0.66
ACTN1-205ENST00000538545 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.67
ACTN1-205ENST00000538545 TMEM183BQ1AE95 376 aa10.9□□□□□ -0.67
ACTN1-205ENST00000538545 KCNIP4Q6PIL6 250 aa10.9□□□□□ -0.67
ACTN1-205ENST00000538545 RNF182Q8N6D2 247 aa10.9□□□□□ -0.67
ACTN1-205ENST00000538545 SRD5A3Q9H8P0 318 aa10.9□□□□□ -0.67
ACTN1-205ENST00000538545 IGLV2-11P01706 119 aa10.89□□□□□ -0.67
ACTN1-205ENST00000538545 IGF1P05019 195 aa10.89□□□□□ -0.67
ACTN1-205ENST00000538545 CD99P14209 185 aa10.89□□□□□ -0.67
ACTN1-205ENST00000538545 SRP14P37108 136 aaKnown RBP10.89□□□□□ -0.67
ACTN1-205ENST00000538545 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
ACTN1-205ENST00000538545 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
ACTN1-205ENST00000538545 IL36BQ9NZH7 164 aa10.89□□□□□ -0.67
ACTN1-205ENST00000538545 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-205ENST00000538545 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-205ENST00000538545 MRPL54Q6P161 138 aaKnown RBP10.89□□□□□ -0.67
ACTN1-205ENST00000538545 OTORQ9NRC9 128 aa10.89□□□□□ -0.67
ACTN1-205ENST00000538545 PITPNC1Q9UKF7 332 aa10.89□□□□□ -0.67
ACTN1-205ENST00000538545 IFITM10A6NMD0 228 aa10.88□□□□□ -0.67
ACTN1-205ENST00000538545 AP4M1O00189 453 aa10.88□□□□□ -0.67
ACTN1-205ENST00000538545 BMPR1BO00238 502 aa10.88□□□□□ -0.67
ACTN1-205ENST00000538545 TAS2R60P59551 318 aa10.88□□□□□ -0.67
ACTN1-205ENST00000538545 IGKV3-7A0A075B6H7 116 aa10.88□□□□□ -0.67
ACTN1-205ENST00000538545 PPP1R2P9O14990 202 aa10.88□□□□□ -0.67
ACTN1-205ENST00000538545 FOSL1P15407 271 aa10.88□□□□□ -0.67
ACTN1-205ENST00000538545 ARL3P36405 182 aa10.88□□□□□ -0.67
ACTN1-205ENST00000538545 TSPAN9O75954 239 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 GZMBP10144 247 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 FOXL1Q12952 345 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 RPEL1Q2QD12 228 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 Q8TAT8 98 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 TXN2Q99757 166 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 ZNF785A8K8V0 405 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 BUB3O43684 328 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 C8orf49Q96NF6 230 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 GPR82Q96P67 336 aa10.87□□□□□ -0.67
ACTN1-205ENST00000538545 RPL19P84098 196 aaKnown RBP10.86□□□□□ -0.67
ACTN1-205ENST00000538545 GPR61Q9BZJ8 451 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 KLF12Q9Y4X4 402 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 NIPBLQ6KC79 2804 aaeCLIP10.86□□□□□ -0.67
ACTN1-205ENST00000538545 TRBV7-1A0A0A6YYK4 115 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 IGHG4P01861 327 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 TCF24Q7RTU0 167 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 Q86TA4 180 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 MLST8Q9BVC4 326 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 TRAPPC1Q9Y5R8 145 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 ANK3Q12955 4377 aaKnown RBP10.86□□□□□ -0.67
ACTN1-205ENST00000538545 OTOGQ6ZRI0 2925 aa10.86□□□□□ -0.67
ACTN1-205ENST00000538545 GRIFINA4D1Z8 144 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 PRAC2D3DTV9 90 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 UBE2CO00762 179 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 LTAP01374 205 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 RAB9AP51151 201 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 DEFB1P60022 68 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 SSTP61278 116 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 KIAA1644Q3SXP7 199 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 LRRC75A-AS1Q8N1F1 130 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 OR4X2Q8NGF9 303 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 OSTCQ9NRP0 149 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 DIRC3C9JPN6 131 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 J3QLI3 93 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 GATCO43716 136 aaKnown RBP10.85□□□□□ -0.67
ACTN1-205ENST00000538545 FSHBP01225 129 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 RPL7P18124 248 aaKnown RBP10.85□□□□□ -0.67
ACTN1-205ENST00000538545 CRIP2P52943 208 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-205ENST00000538545 ACTL10Q5JWF8 245 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 ZC2HC1AQ96GY0 325 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 VGLL1Q99990 258 aa10.85□□□□□ -0.67
ACTN1-205ENST00000538545 KLK9Q2XQG4 91 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 CYB5R2Q6BCY4 276 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 OR5R1Q8NH85 324 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 M0QZK8 103 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 ZNF705DP0CH99 300 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-205ENST00000538545 ZNF705BP0CI00 300 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-205ENST00000538545 SRD5A1P18405 259 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 RAB4BP61018 213 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 ERCC8Q13216 396 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 FMC1Q96HJ9 113 aa10.84□□□□□ -0.67
ACTN1-205ENST00000538545 FAM223BA6NKX1 122 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 SNURFLB1AK76 121 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 TYMSP04818 313 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 RPLP1P05386 114 aaKnown RBP10.83□□□□□ -0.68
ACTN1-205ENST00000538545 Q6YL49 198 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 FAM223AQ8IWN6 122 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 AAMDCQ9H7C9 122 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 ZMAT5Q9UDW3 170 aaKnown RBP10.83□□□□□ -0.68
ACTN1-205ENST00000538545 VPREB3Q9UKI3 123 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 PSG8Q9UQ74 426 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms