RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 F8W735 103 aaPredicted RBP5.19□□□□□ -1.58
USP28-206ENST00000538224 H3BUA1 57 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 ATP6V0E1O15342 81 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 ZZEF1O43149 2961 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 BRI3O95415 125 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 EGR2P11161 476 aaPredicted RBP5.19□□□□□ -1.58
USP28-206ENST00000538224 SRIP30626 198 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 RHOGP84095 191 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 KLF5Q13887 457 aaPredicted RBP5.19□□□□□ -1.58
USP28-206ENST00000538224 ECSCRQ19T08 205 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 C15orf32Q32M92 178 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 KLF17Q5JT82 389 aaPredicted RBP5.19□□□□□ -1.58
USP28-206ENST00000538224 C1orf194Q5T5A4 169 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 COX8CQ7Z4L0 72 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 PRNTQ86SH4 94 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 MRPL52Q86TS9 123 aaKnown RBP5.19□□□□□ -1.58
USP28-206ENST00000538224 FAM223AQ8IWN6 122 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 TMEM256Q8N2U0 113 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 C5orf56Q8N8D9 126 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 AJUBAQ96IF1 538 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 SLC50A1Q9BRV3 221 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 NDFIP1Q9BT67 221 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 MEGF9Q9H1U4 602 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 GNB4Q9HAV0 340 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 CLEC5AQ9NY25 188 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 NAGKQ9UJ70 344 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 PSG8Q9UQ74 426 aa5.19□□□□□ -1.58
USP28-206ENST00000538224 SPTBN1Q01082 2364 aaKnown RBP5.19□□□□□ -1.58
USP28-206ENST00000538224 PKD1L2Q7Z442 2459 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 H3BTX0 84 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 SPINK4O60575 86 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 SCGB1D1O95968 90 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 CA1P00915 261 aaPredicted RBP5.18□□□□□ -1.58
USP28-206ENST00000538224 IGLV2-11P01706 119 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 CTSGP08311 255 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 SLC25A16P16260 332 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 DDTP30046 118 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 GPR183P32249 361 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 FOXA3P55318 350 aaPredicted RBP5.18□□□□□ -1.58
USP28-206ENST00000538224 ATP5J2P56134 94 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 RPS20P60866 119 aaKnown RBP5.18□□□□□ -1.58
USP28-206ENST00000538224 SLC35B1P78383 322 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 RIGQ13278 110 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 C9orf152Q5JTZ5 239 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 FAM120AOSQ5T036 256 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 TOMM20LQ6UXN7 152 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 EXOC3-AS1Q8N2X6 119 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 OR2D3Q8NGH3 330 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 HSPB9Q9BQS6 159 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 SMG1Q96Q15 3661 aaKnown RBP5.18□□□□□ -1.58
USP28-206ENST00000538224 NBASA2RRP1 2371 aa5.18□□□□□ -1.58
USP28-206ENST00000538224 PIEZO1Q92508 2521 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 TRAV41A0A0B4J266 112 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 TRAV40A0A0B4J280 105 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 IGHV4-61A0A0C4DH41 118 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 A0A1B0GUT8 65 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 RBAKDNA6NC62 111 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 A8MWP6 167 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 B4DSR2 109 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 CHEK1O14757 476 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 ZNF324O75467 553 aaPredicted RBP5.17□□□□□ -1.58
USP28-206ENST00000538224 GPX1P07203 203 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 MSMBP08118 114 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 SNRPCP09234 159 aaKnown RBP5.17□□□□□ -1.58
USP28-206ENST00000538224 PMCHP20382 165 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 BMI1P35226 326 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 AMTP48728 403 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 SRSF2Q01130 221 aaKnown RBP5.17□□□□□ -1.58
USP28-206ENST00000538224 ATP5G2Q06055 141 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 SLAQ13239 276 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 MAJINQ3KP22 176 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 FBLN7Q53RD9 439 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 GATD1Q8NB37 220 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 C18orf32Q8TCD1 76 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 MRPL53Q96EL3 112 aaKnown RBP5.17□□□□□ -1.58
USP28-206ENST00000538224 ZC2HC1AQ96GY0 325 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 METTL26Q96S19 204 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 ZFAND3Q9H8U3 227 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 HIF1ANQ9NWT6 349 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 ZNF580Q9UK33 172 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 TP53TG3Q9ULZ0 132 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 TACC2O95359 2948 aa5.17□□□□□ -1.58
USP28-206ENST00000538224 ABCA2Q9BZC7 2435 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 TRAV8-1A0A0A6YYK1 113 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 KIR2DL5BA0A0G2JN68 375 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 KIR2DL5BA0A0G2JPC4 375 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 A0A1B0GUS0 222 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 ZNF705FA8MVS1 300 aaPredicted RBP5.16□□□□□ -1.58
USP28-206ENST00000538224 J3QLI3 93 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 HSBP1O75506 76 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 IGF1P05019 195 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 ZNF705DP0CH99 300 aaPredicted RBP5.16□□□□□ -1.58
USP28-206ENST00000538224 ZNF705BP0CI00 300 aaPredicted RBP5.16□□□□□ -1.58
USP28-206ENST00000538224 CAMPP49913 170 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 LINC00310P59036 64 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 CDPF1Q6NVV7 123 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 TCF24Q7RTU0 167 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 KIR2DL5AQ8N109 375 aa5.16□□□□□ -1.58
USP28-206ENST00000538224 CHCHD1Q96BP2 118 aaKnown RBP5.16□□□□□ -1.58
USP28-206ENST00000538224 USMG5Q96IX5 58 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms