RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 DEFB112Q30KQ8 113 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 RNF212Q495C1 297 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 ZNF343Q6P1L6 599 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 LINC01551Q86U37 167 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 BPIFA4PQ86YQ2 179 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 MAPK1IP1LQ8NDC0 245 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 OR4F17Q8NGA8 305 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 HIST1H2BAQ96A08 127 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 ISOC2Q96AB3 205 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 USMG5Q96IX5 58 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 YPEL4Q96NS1 127 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 DERL1Q9BUN8 251 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 VPREB3Q9UKI3 123 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 MYO18BQ8IUG5 2567 aa4.25□□□□□ -1.73
NPIPB3-208ENST00000537983 TRBV20OR9-2A0A075B6H5 130 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 TMEM89A2RUT3 159 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 DNAJC9-AS1A6NH13 148 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 ZNF98A6NK75 572 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 H7BYZ3 331 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 J3KRW8 73 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 PEX7O00628 323 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 TGOLN2O43493 480 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 IGHV4-59P01825 116 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 TRGV3P03979 118 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 S100A9P06702 114 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 CTSGP08311 255 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 IGLC2P0DOY2 106 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 RPL7P18124 248 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 S100PP25815 95 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 CRYBB3P26998 211 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 GPR183P32249 361 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 IER3P46695 156 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 GNG4P50150 75 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 TAS2R60P59551 318 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 ATP5G2Q06055 141 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 USF2Q15853 346 aaPredicted RBP4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 CENPWQ5EE01 88 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 C9orf152Q5JTZ5 239 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 LYPD1Q8N2G4 141 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 C5orf17Q8NAS9 161 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 SMIM12Q96EX1 92 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 BTF3L4Q96K17 158 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 IGF2BP2-AS1Q96M15 143 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 GPR82Q96P67 336 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 OR5B12Q96R08 314 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 ATG101Q9BSB4 218 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 Q9H3A6 140 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 OTORQ9NRC9 128 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 RABAC1Q9UI14 185 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 SOX21Q9Y651 276 aaPredicted RBP4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 S4R3C0 116 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 SPTAN1Q13813 2472 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 VPS13CQ709C8 3753 aa4.24□□□□□ -1.73
NPIPB3-208ENST00000537983 MED13LQ71F56 2210 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 FBN2P35556 2912 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 TRBV24-1A0A075B6N3 115 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 A0A087X0K7 114 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 A0A0G2JLM5 398 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 SERTM2A0A1B0GWG4 89 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 HELTA6NFD8 242 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 C1orf196B1AJZ1 125 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 MRPS12O15235 138 aaKnown RBP4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 ZNF253O75346 499 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 IGHV3-23P01764 117 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 SLC25A5P05141 298 aaKnown RBP4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 RAB5AP20339 215 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 SRP14P37108 136 aaKnown RBP4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 TPPP2P59282 170 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 RAB5BP61020 215 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 FLI1Q01543 452 aaPredicted RBP4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 ELOBQ15370 118 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 LEMD1Q68G75 181 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 TEX38Q6PEX7 206 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 KCNIP4Q6PIL6 250 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 FAM24BQ8N5W8 94 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 TMEM86BQ8N661 226 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 ARL6IP6Q8N6S5 226 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 WFDC11Q8NEX6 87 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 BLNKQ8WV28 456 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 RPL36ALQ969Q0 106 aaKnown RBP4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 SFRP2Q96HF1 295 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 FMC1Q96HJ9 113 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 IMMP2LQ96T52 175 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 CHRDL1Q9BU40 450 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 NPFFR1Q9GZQ6 430 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 ZNF586Q9NXT0 402 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 EPDR1Q9UM22 224 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 LRRK2Q5S007 2527 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 FLNCQ14315 2725 aa4.23□□□□□ -1.73
NPIPB3-208ENST00000537983 NBPF19A0A087WUL8 3843 aa4.22□□□□□ -1.73
NPIPB3-208ENST00000537983 TRAV9-1A0A075B6T8 112 aa4.22□□□□□ -1.73
NPIPB3-208ENST00000537983 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.22□□□□□ -1.73
NPIPB3-208ENST00000537983 TRBV6-1A0A0K0K1D8 114 aa4.22□□□□□ -1.73
NPIPB3-208ENST00000537983 PGPA6NDG6 321 aa4.22□□□□□ -1.73
NPIPB3-208ENST00000537983 GAGE10A6NGK3 116 aa4.22□□□□□ -1.73
NPIPB3-208ENST00000537983 K7EN84 100 aa4.22□□□□□ -1.73
NPIPB3-208ENST00000537983 NDUFA4O00483 81 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms