RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
USP44-203ENST00000537435 ABCA4P78363 2273 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 TLN1Q9Y490 2541 aaKnown RBP11.26□□□□□ -0.61
USP44-203ENST00000537435 MUC6Q6W4X9 2439 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 ARHGAP32A7KAX9 2087 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 HINT1P49773 126 aaPredicted RBP11.26□□□□□ -0.61
USP44-203ENST00000537435 CRIP1P50238 77 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 CDSNQ15517 529 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 CYB5R2Q6BCY4 276 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 FANCD2OSQ96PS1 177 aa11.26□□□□□ -0.61
USP44-203ENST00000537435 LOC105371242A0A075B767 164 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 ODF3BA8MYP8 253 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 NDUFB8O95169 186 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 RIGQ13278 110 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 C1RLQ9NZP8 487 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 IGLV11-55A0A075B6I3 123 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 M0R1W7 72 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 CSN3P07498 182 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 MFAP4P55083 255 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
USP44-203ENST00000537435 ANKHD1Q8IWZ3 2542 aaKnown RBP11.25□□□□□ -0.61
USP44-203ENST00000537435 PRTN3P24158 256 aa11.24□□□□□ -0.61
USP44-203ENST00000537435 ARPC1AQ92747 370 aa11.24□□□□□ -0.61
USP44-203ENST00000537435 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
USP44-203ENST00000537435 NPIPB5A8MRT5 1133 aa11.24□□□□□ -0.61
USP44-203ENST00000537435 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
USP44-203ENST00000537435 NDPQ00604 133 aa11.24□□□□□ -0.61
USP44-203ENST00000537435 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
USP44-203ENST00000537435 PTPRQQ9UMZ3 2332 aa11.24□□□□□ -0.61
USP44-203ENST00000537435 NCBP2LA6PVI3 153 aaKnown RBP11.23□□□□□ -0.61
USP44-203ENST00000537435 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
USP44-203ENST00000537435 ZNF562Q6V9R5 426 aa11.23□□□□□ -0.61
USP44-203ENST00000537435 AAMDCQ9H7C9 122 aa11.23□□□□□ -0.61
USP44-203ENST00000537435 IGHV3-23P01764 117 aa11.23□□□□□ -0.61
USP44-203ENST00000537435 PDE6HQ13956 83 aa11.23□□□□□ -0.61
USP44-203ENST00000537435 S100A7AQ86SG5 101 aa11.23□□□□□ -0.61
USP44-203ENST00000537435 DYNAPQ8N1N2 210 aa11.23□□□□□ -0.61
USP44-203ENST00000537435 GATD1Q8NB37 220 aa11.23□□□□□ -0.61
USP44-203ENST00000537435 TACC2O95359 2948 aa11.22□□□□□ -0.61
USP44-203ENST00000537435 hDV102S1A0JD36 115 aa11.22□□□□□ -0.61
USP44-203ENST00000537435 CT45A10P0DMU9 189 aa11.22□□□□□ -0.61
USP44-203ENST00000537435 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
USP44-203ENST00000537435 MAP1LC3CQ9BXW4 147 aa11.22□□□□□ -0.61
USP44-203ENST00000537435 C21orf62Q9NYP8 219 aa11.22□□□□□ -0.61
USP44-203ENST00000537435 ADORA2A-AS1P86434 159 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 TTC9CQ8N5M4 171 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 NEU4Q8WWR8 484 aaPredicted RBP11.21□□□□□ -0.61
USP44-203ENST00000537435 TMEM191AQ9H0A3 160 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 TP73-AS1Q9UF72 201 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 TIMM8BQ9Y5J9 83 aaPredicted RBP11.21□□□□□ -0.61
USP44-203ENST00000537435 RELNP78509 3460 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 CSN1S1P47710 185 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 Q6AWC8 147 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 C11orf71Q6IPW1 123 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 MCRIP2Q9BUT9 160 aaKnown RBP11.21□□□□□ -0.61
USP44-203ENST00000537435 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
USP44-203ENST00000537435 A0A1B0GW15 77 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 H0Y8G0 127 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 VMO1Q7Z5L0 202 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 TMSB15BA0A087X1C1 80 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 CCDC144NLQ6NUI1 221 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 UNQ5815/PRO19632Q6UWF5 114 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 AP5S1Q9NUS5 200 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 SPTA1P02549 2419 aa11.2□□□□□ -0.62
USP44-203ENST00000537435 CEP295Q9C0D2 2601 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
USP44-203ENST00000537435 OR2T8A6NH00 312 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
USP44-203ENST00000537435 PSG9Q00887 426 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 THYN1Q9P016 225 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 LRBAP50851 2863 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 TMEM189A5PLL7 270 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 SH2D1AO60880 128 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 LYZL1Q6UWQ5 148 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 Q6ZVH6 145 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 Q8N6K4 173 aa11.19□□□□□ -0.62
USP44-203ENST00000537435 SERTM2A0A1B0GWG4 89 aa11.18□□□□□ -0.62
USP44-203ENST00000537435 HSBP1L1C9JCN9 74 aa11.18□□□□□ -0.62
USP44-203ENST00000537435 RPL7P18124 248 aaKnown RBP11.18□□□□□ -0.62
USP44-203ENST00000537435 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
USP44-203ENST00000537435 PRSS3P2Q8NHM4 247 aa11.18□□□□□ -0.62
USP44-203ENST00000537435 TMEM213A2RRL7 107 aa11.18□□□□□ -0.62
USP44-203ENST00000537435 TMEM11P17152 192 aa11.18□□□□□ -0.62
USP44-203ENST00000537435 ZNF493Q6ZR52 646 aa11.18□□□□□ -0.62
USP44-203ENST00000537435 ORAOV1Q8WV07 137 aa11.18□□□□□ -0.62
USP44-203ENST00000537435 TCF21O43680 179 aa11.17□□□□□ -0.62
USP44-203ENST00000537435 RELQ04864 619 aaPredicted RBP11.17□□□□□ -0.62
USP44-203ENST00000537435 PMCHL2Q9BQD1 86 aa11.17□□□□□ -0.62
USP44-203ENST00000537435 CTSGP08311 255 aa11.17□□□□□ -0.62
USP44-203ENST00000537435 ZFP36P26651 326 aaKnown RBP11.17□□□□□ -0.62
USP44-203ENST00000537435 C1orf122Q6ZSJ8 110 aa11.17□□□□□ -0.62
USP44-203ENST00000537435 RABAC1Q9UI14 185 aa11.17□□□□□ -0.62
USP44-203ENST00000537435 IGHV7-81A0A0B4J1V7 117 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 OOSP1A8MZH6 123 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 D6R8Y8 96 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms