RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CFAP126Q5VTH2 177 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 ZNF329Q86UD4 541 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 PPP1R27Q86WC6 154 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 PDPNQ86YL7 162 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 PRDM14Q9GZV8 571 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 PKDREJQ9NTG1 2253 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 OR1L4Q8NGR5 311 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 PLPPR2Q96GM1 343 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 H3BVH4 76 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 PRSS1P07477 247 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 FAM159AQ6UWV7 190 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 COQ2Q96H96 371 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 SLC25A33Q9BSK2 321 aa8.76□□□□□ -1.01
CLSTN3-207ENST00000537408 LTAP01374 205 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 TWIST1Q15672 202 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 ADIPOQQ15848 244 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 SLC25A48Q6ZT89 311 aaKnown RBP8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 RFESDQ8TAC1 157 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 FGFBP3Q8TAT2 258 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 PIFOQ8TCI5 191 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 IFI27P40305 119 aaPredicted RBP8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 TPPP3Q9BW30 176 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 PRSS46E5RG02 174 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 IGKCP01834 107 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 IGHG3P01860 377 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 DUTP33316 252 aaKnown RBP8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 LINC01560Q8TB33 94 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 FMC1Q96HJ9 113 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 CSDC2Q9Y534 153 aaKnown RBP8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 ROS1P08922 2347 aa8.75□□□□□ -1.01
CLSTN3-207ENST00000537408 IGLV3-32A0A0A0MS00 114 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 SPRY3O43610 288 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 POU2AF1Q16633 256 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 PPDPFQ9H3Y8 114 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 TRAV8-2A0A0B4J237 113 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 OOEPA6NGQ2 149 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 OR2H2O95918 312 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 EVI2AP22794 236 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 MDP1Q86V88 176 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 OR10J6PQ8NGY7 276 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 ZNF503Q96F45 646 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 NCBP2LA6PVI3 153 aaKnown RBP8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 ENSAO43768 121 aaKnown RBP8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 NHLRC4P0CG21 123 aaPredicted RBP8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 NRGNQ92686 78 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 RASL11BQ9BPW5 248 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 TMEM133Q9H2Q1 129 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 EPDR1Q9UM22 224 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 PINLYPA6NC86 204 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 ZNHIT1O43257 154 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 SCGB1C2P0DMR2 95 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 HLA-DRB4P13762 266 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 CCL19Q99731 98 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 HLA-DRB4X5D2U9 266 aa8.74□□□□□ -1.01
CLSTN3-207ENST00000537408 J3QT63 122 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 KIR2DS2P43631 304 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 C10orf113Q5VZT2 155 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 Q6Q795 121 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 S1PR3Q99500 378 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 LAMA2P24043 3122 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 NCOA6Q14686 2063 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 RBP4P02753 201 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 NFE4Q86UQ8 179 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 PIEZO2Q9H5I5 2752 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 DPM2O94777 84 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 GNG5P63218 68 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 HES1Q14469 280 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 MOB3BQ86TA1 216 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 RPEQ96AT9 228 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 DKK2Q9UBU2 259 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 ZNF407Q9C0G0 2248 aa8.73□□□□□ -1.01
CLSTN3-207ENST00000537408 DIAPH2-AS1Q14236 149 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 KRTAP27-1Q3LI81 207 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 Q6P435 159 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 KIR2DL4Q99706 377 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 GTSCR1Q86UQ5 136 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 OR13C6PQ8NH95 151 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 TRAV25A0A0B4J276 109 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 DEFB108AA8MXU0 73 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 HSPE1P61604 102 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 ORMDL3Q8N138 153 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 SGK494Q96LW2 274 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 MED13Q9UHV7 2174 aa8.72□□□□□ -1.01
CLSTN3-207ENST00000537408 PGPA6NDG6 321 aa8.71□□□□□ -1.01
CLSTN3-207ENST00000537408 DNAJC30Q96LL9 226 aa8.71□□□□□ -1.01
CLSTN3-207ENST00000537408 PRSS22Q9GZN4 317 aa8.71□□□□□ -1.01
CLSTN3-207ENST00000537408 NDUFS7O75251 213 aa8.71□□□□□ -1.01
CLSTN3-207ENST00000537408 MOSP00540 346 aa8.71□□□□□ -1.01
CLSTN3-207ENST00000537408 C9orf106Q8NAJ2 232 aa8.71□□□□□ -1.01
CLSTN3-207ENST00000537408 LINC00473A8K010 186 aa8.71□□□□□ -1.02
CLSTN3-207ENST00000537408 C12orf77C9JDV5 145 aa8.71□□□□□ -1.02
CLSTN3-207ENST00000537408 ATP5LO75964 103 aa8.71□□□□□ -1.02
CLSTN3-207ENST00000537408 SPRR3Q9UBC9 169 aa8.71□□□□□ -1.02
CLSTN3-207ENST00000537408 TRANK1O15050 2925 aa8.71□□□□□ -1.02
CLSTN3-207ENST00000537408 A0A0C4DFX4 3053 aa8.71□□□□□ -1.02
CLSTN3-207ENST00000537408 K7EMI3 77 aa8.71□□□□□ -1.02
CLSTN3-207ENST00000537408 PYYP10082 97 aa8.71□□□□□ -1.02
CLSTN3-207ENST00000537408 TMSB15BA0A087X1C1 80 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms