RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TMEM167BQ9NRX6 74 aa8.67□□□□□ -1.02
CDCA3-206ENST00000536241 A0A087X0K7 114 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 DNASE2O00115 360 aaPredicted RBP8.66□□□□□ -1.02
CDCA3-206ENST00000536241 NDUFB4O95168 129 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 PSMB3P49720 205 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 UBE2G2P60604 165 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 C9orf66Q5T8R8 295 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 MCRIP2Q9BUT9 160 aaKnown RBP8.66□□□□□ -1.02
CDCA3-206ENST00000536241 MS4A6AQ9H2W1 248 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 NRN1Q9NPD7 142 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 GNG13Q9P2W3 67 aa8.66□□□□□ -1.02
CDCA3-206ENST00000536241 SORL1Q92673 2214 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 TRAV25A0A0B4J276 109 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 SLC17A3O00476 420 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 TSPAN4O14817 238 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 PAGE4O60829 102 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 INSL3P51460 131 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 PAFAH1B2P68402 229 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 GUK1Q16774 197 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 HAGHQ16775 308 aa8.65□□□□□ -1.02
CDCA3-206ENST00000536241 YTHDF2Q9Y5A9 579 aaKnown RBP8.65□□□□□ -1.02
CDCA3-206ENST00000536241 NOTCH3Q9UM47 2321 aa8.65□□□□□ -1.03
CDCA3-206ENST00000536241 PGPA6NDG6 321 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 SUMO1P63165 101 aaKnown RBP8.64□□□□□ -1.03
CDCA3-206ENST00000536241 GUCA2BQ16661 112 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 EXOC3-AS1Q8N2X6 119 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 DCANP1Q8TF63 244 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 C16orf92Q96LL3 132 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 RARRES2Q99969 163 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 ZNF331Q9NQX6 463 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-206ENST00000536241 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 FAM74A7A6NL05 159 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 K7EQG2 157 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 SOCS3O14543 225 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 PRB4P10163 310 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-206ENST00000536241 HLA-DMBP28068 263 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 MEOX2P50222 304 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 PPT1P50897 306 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 PMS2P11Q13670 270 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 PDE6HQ13956 83 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 ICAM4Q14773 271 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 OXLD1Q5BKU9 147 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 PRR31Q5SQ13 230 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 CST9LP1Q5W188 147 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 FAM24BQ8N5W8 94 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 Q9H3A6 140 aa8.64□□□□□ -1.03
CDCA3-206ENST00000536241 A0A1W2PRE2 83 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 RBFOX3A6NFN3 312 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 ZNF253O75346 499 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 PSG9Q00887 426 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 LYPD1Q8N2G4 141 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 RNF182Q8N6D2 247 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 OR2K2Q8NGT1 345 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 LINC00052Q96N35 136 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 SLC50A1Q9BRV3 221 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 MANBALQ9NQG1 85 aa8.63□□□□□ -1.03
CDCA3-206ENST00000536241 ZNF256Q9Y2P7 627 aaPredicted RBP8.63□□□□□ -1.03
CDCA3-206ENST00000536241 ZNF705FA8MVS1 300 aaPredicted RBP8.62□□□□□ -1.03
CDCA3-206ENST00000536241 ID1P41134 155 aa8.62□□□□□ -1.03
CDCA3-206ENST00000536241 ATP5G3P48201 142 aa8.62□□□□□ -1.03
CDCA3-206ENST00000536241 LCN12Q6JVE5 192 aa8.62□□□□□ -1.03
CDCA3-206ENST00000536241 RXFP4Q8TDU9 374 aa8.62□□□□□ -1.03
CDCA3-206ENST00000536241 C20orf173Q96LM9 149 aa8.62□□□□□ -1.03
CDCA3-206ENST00000536241 FAM210AQ96ND0 272 aa8.62□□□□□ -1.03
CDCA3-206ENST00000536241 SPAG8Q99932 426 aaPredicted RBP8.62□□□□□ -1.03
CDCA3-206ENST00000536241 EIF5A2Q9GZV4 153 aaKnown RBP8.62□□□□□ -1.03
CDCA3-206ENST00000536241 AAMDCQ9H7C9 122 aa8.62□□□□□ -1.03
CDCA3-206ENST00000536241 TRAV2A0A0B4J234 112 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 LOC102723971A0A1B0GUV8 181 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 GGTLC3B5MD39 225 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 C11orf94C9JXX5 98 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 M0R3E3 92 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 ISLRO14498 428 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 IFNA1P01562 189 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 ZNF688P0C7X2 276 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 BCL2P10415 239 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 SRSF3P84103 164 aaKnown RBP8.61□□□□□ -1.03
CDCA3-206ENST00000536241 PSG3Q16557 428 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 TOR2AQ5JU69 321 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 OTORQ9NRC9 128 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 VAX2Q9UIW0 290 aa8.61□□□□□ -1.03
CDCA3-206ENST00000536241 LINC00862A6NCI5 91 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 OR4C46A6NHA9 309 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 SLC25A5P05141 298 aaKnown RBP8.6□□□□□ -1.03
CDCA3-206ENST00000536241 DEFB1P60022 68 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 PSMG4Q5JS54 123 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 ZNF506Q5JVG8 444 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 CCDC28AQ8IWP9 274 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-206ENST00000536241 ARL2-SNX15V9GYD0 113 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 VWFP04275 2813 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 TRRAPQ9Y4A5 3859 aa8.6□□□□□ -1.03
CDCA3-206ENST00000536241 WIPF1O43516 503 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 CD7P09564 240 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 DEFB131AP59861 70 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 CD81P60033 236 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 SNRPD3P62318 126 aaKnown RBP8.59□□□□□ -1.03
CDCA3-206ENST00000536241 GNG5P63218 68 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 MEF2BQ02080 365 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms