RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 SFT2D1Q8WV19 159 aa12.23□□□□□ -0.45
VAMP1-205ENST00000535927 TRAV5A0A0B4J249 113 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 IGHV3-66A0A0C4DH42 116 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 ISLRO14498 428 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 RAB14P61106 215 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 ZNF726P1Q15940 193 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 SPATA31B1PQ5VZV4 182 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 LYPD6BQ8NI32 183 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 TXNDC17Q9BRA2 123 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 PRELID1Q9Y255 219 aa12.22□□□□□ -0.45
VAMP1-205ENST00000535927 TRBV19A0A075B6N1 114 aa12.21□□□□□ -0.45
VAMP1-205ENST00000535927 ARL14EPLP0DKL9 152 aa12.21□□□□□ -0.45
VAMP1-205ENST00000535927 IGLL1P15814 213 aa12.21□□□□□ -0.45
VAMP1-205ENST00000535927 GCHFRP30047 84 aa12.21□□□□□ -0.45
VAMP1-205ENST00000535927 SNRPD3P62318 126 aaKnown RBP12.21□□□□□ -0.45
VAMP1-205ENST00000535927 UBE2L3P68036 154 aaKnown RBP12.21□□□□□ -0.45
VAMP1-205ENST00000535927 FAM74A1Q5RGS3 127 aa12.21□□□□□ -0.45
VAMP1-205ENST00000535927 FXYD5Q96DB9 178 aa12.21□□□□□ -0.45
VAMP1-205ENST00000535927 MS4A6AQ9H2W1 248 aa12.21□□□□□ -0.45
VAMP1-205ENST00000535927 SMAD5-AS1Q9Y6J3 95 aa12.21□□□□□ -0.45
VAMP1-205ENST00000535927 A0A1W2PRE2 83 aa12.2□□□□□ -0.46
VAMP1-205ENST00000535927 K7EQG2 157 aa12.2□□□□□ -0.46
VAMP1-205ENST00000535927 FHITP49789 147 aa12.2□□□□□ -0.46
VAMP1-205ENST00000535927 EGFEM1PQ0D2K5 195 aa12.2□□□□□ -0.46
VAMP1-205ENST00000535927 BEAN1Q3B7T3 259 aa12.2□□□□□ -0.46
VAMP1-205ENST00000535927 DCANP1Q8TF63 244 aa12.2□□□□□ -0.46
VAMP1-205ENST00000535927 ZNF503Q96F45 646 aa12.2□□□□□ -0.46
VAMP1-205ENST00000535927 AAMDCQ9H7C9 122 aa12.2□□□□□ -0.46
VAMP1-205ENST00000535927 EDN2P20800 178 aa12.19□□□□□ -0.46
VAMP1-205ENST00000535927 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
VAMP1-205ENST00000535927 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
VAMP1-205ENST00000535927 TCEAL7Q9BRU2 100 aa12.19□□□□□ -0.46
VAMP1-205ENST00000535927 ZNF331Q9NQX6 463 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-205ENST00000535927 ZNF586Q9NXT0 402 aa12.19□□□□□ -0.46
VAMP1-205ENST00000535927 H3BQ15 152 aa12.18□□□□□ -0.46
VAMP1-205ENST00000535927 NDUFS6O75380 124 aaKnown RBP12.18□□□□□ -0.46
VAMP1-205ENST00000535927 IFNA1P01562 189 aa12.18□□□□□ -0.46
VAMP1-205ENST00000535927 PYYP10082 97 aa12.18□□□□□ -0.46
VAMP1-205ENST00000535927 GUCA2BQ16661 112 aa12.18□□□□□ -0.46
VAMP1-205ENST00000535927 RXFP4Q8TDU9 374 aa12.18□□□□□ -0.46
VAMP1-205ENST00000535927 C16orf92Q96LL3 132 aa12.18□□□□□ -0.46
VAMP1-205ENST00000535927 MANBALQ9NQG1 85 aa12.18□□□□□ -0.46
VAMP1-205ENST00000535927 ZNF256Q9Y2P7 627 aaPredicted RBP12.18□□□□□ -0.46
VAMP1-205ENST00000535927 SOCS3O14543 225 aa12.17□□□□□ -0.46
VAMP1-205ENST00000535927 RGS13O14921 159 aa12.17□□□□□ -0.46
VAMP1-205ENST00000535927 SAMD5Q5TGI4 173 aa12.17□□□□□ -0.46
VAMP1-205ENST00000535927 SSX7Q7RTT5 188 aa12.17□□□□□ -0.46
VAMP1-205ENST00000535927 OTORQ9NRC9 128 aa12.17□□□□□ -0.46
VAMP1-205ENST00000535927 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
VAMP1-205ENST00000535927 OR10J4P0C629 311 aa12.16□□□□□ -0.46
VAMP1-205ENST00000535927 IFITM2Q01629 132 aa12.16□□□□□ -0.46
VAMP1-205ENST00000535927 GTSCR1Q86UQ5 136 aa12.16□□□□□ -0.46
VAMP1-205ENST00000535927 VWFP04275 2813 aa12.16□□□□□ -0.46
VAMP1-205ENST00000535927 SERTM2A0A1B0GWG4 89 aa12.15□□□□□ -0.46
VAMP1-205ENST00000535927 NDUFB4O95168 129 aa12.15□□□□□ -0.46
VAMP1-205ENST00000535927 CSN1S1P47710 185 aa12.15□□□□□ -0.46
VAMP1-205ENST00000535927 PSG3Q16557 428 aa12.15□□□□□ -0.46
VAMP1-205ENST00000535927 CLLU1Q5K131 121 aa12.15□□□□□ -0.46
VAMP1-205ENST00000535927 KPRPQ5T749 579 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-205ENST00000535927 BLNKQ8WV28 456 aa12.15□□□□□ -0.46
VAMP1-205ENST00000535927 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
VAMP1-205ENST00000535927 IZUMO1RA6ND01 250 aa12.14□□□□□ -0.47
VAMP1-205ENST00000535927 FBLL1A6NHQ2 334 aaKnown RBP12.14□□□□□ -0.47
VAMP1-205ENST00000535927 NMBP08949 121 aa12.14□□□□□ -0.47
VAMP1-205ENST00000535927 FGF8P55075 233 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-205ENST00000535927 RANP62826 216 aaKnown RBP12.14□□□□□ -0.47
VAMP1-205ENST00000535927 OXLD1Q5BKU9 147 aa12.14□□□□□ -0.47
VAMP1-205ENST00000535927 IQCF2Q8IXL9 164 aa12.14□□□□□ -0.47
VAMP1-205ENST00000535927 GBGT1Q8N5D6 347 aa12.14□□□□□ -0.47
VAMP1-205ENST00000535927 SMDT1Q9H4I9 107 aa12.14□□□□□ -0.47
VAMP1-205ENST00000535927 IGKV3-7A0A075B6H7 116 aa12.13□□□□□ -0.47
VAMP1-205ENST00000535927 OR11H12B2RN74 326 aa12.13□□□□□ -0.47
VAMP1-205ENST00000535927 F6UZH7 168 aa12.13□□□□□ -0.47
VAMP1-205ENST00000535927 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
VAMP1-205ENST00000535927 C5orf17Q8NAS9 161 aa12.13□□□□□ -0.47
VAMP1-205ENST00000535927 CMTM2Q8TAZ6 248 aa12.13□□□□□ -0.47
VAMP1-205ENST00000535927 Q9H3A6 140 aa12.13□□□□□ -0.47
VAMP1-205ENST00000535927 TRAV8-2A0A0B4J237 113 aa12.12□□□□□ -0.47
VAMP1-205ENST00000535927 FAM74A7A6NL05 159 aa12.12□□□□□ -0.47
VAMP1-205ENST00000535927 HIST1H2BAQ96A08 127 aa12.12□□□□□ -0.47
VAMP1-205ENST00000535927 CLUHP3Q96NS8 147 aa12.12□□□□□ -0.47
VAMP1-205ENST00000535927 TMPRSS5Q9H3S3 457 aa12.12□□□□□ -0.47
VAMP1-205ENST00000535927 TRRAPQ9Y4A5 3859 aa12.12□□□□□ -0.47
VAMP1-205ENST00000535927 RBAKDNA6NC62 111 aa12.11□□□□□ -0.47
VAMP1-205ENST00000535927 PGPA6NDG6 321 aa12.11□□□□□ -0.47
VAMP1-205ENST00000535927 K7EQM0 130 aa12.11□□□□□ -0.47
VAMP1-205ENST00000535927 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
VAMP1-205ENST00000535927 TFPI2P48307 235 aa12.11□□□□□ -0.47
VAMP1-205ENST00000535927 RPUSD4Q96CM3 377 aaKnown RBP12.11□□□□□ -0.47
VAMP1-205ENST00000535927 VAX2Q9UIW0 290 aa12.11□□□□□ -0.47
VAMP1-205ENST00000535927 SLC17A3O00476 420 aa12.1□□□□□ -0.47
VAMP1-205ENST00000535927 DUSP14O95147 198 aaKnown RBP12.1□□□□□ -0.47
VAMP1-205ENST00000535927 SUMO1P63165 101 aaKnown RBP12.1□□□□□ -0.47
VAMP1-205ENST00000535927 DEFA6Q01524 100 aa12.1□□□□□ -0.47
VAMP1-205ENST00000535927 ICAM4Q14773 271 aa12.1□□□□□ -0.47
VAMP1-205ENST00000535927 EBLN2Q6P2I7 272 aa12.1□□□□□ -0.47
VAMP1-205ENST00000535927 FOXI2Q6ZQN5 318 aa12.1□□□□□ -0.47
VAMP1-205ENST00000535927 LINC00052Q96N35 136 aa12.1□□□□□ -0.47
VAMP1-205ENST00000535927 MED9Q9NWA0 146 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms