RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 MAP6D1Q9H9H5 199 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 KCNIP2Q9NS61 270 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 NBEAL2Q6ZNJ1 2754 aa8.97□□□□□ -0.97
CHD4-203ENST00000535717 APOC3P02656 99 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 RPL7P18124 248 aaKnown RBP8.96□□□□□ -0.98
CHD4-203ENST00000535717 S100PP25815 95 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 GALR1P47211 349 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 CMC4P56277 68 aaPredicted RBP8.96□□□□□ -0.98
CHD4-203ENST00000535717 ZNF266Q14584 549 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 ZNF124Q15973 351 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 APRG1Q8IVJ8 170 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 KCNRGQ8N5I3 272 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 GATAD1Q8WUU5 269 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 OR51M1Q9H341 326 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 TUBA4BQ9H853 241 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 SRD5A3Q9H8P0 318 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 DNAH9Q9NYC9 4486 aa8.96□□□□□ -0.98
CHD4-203ENST00000535717 TRAV5A0A0B4J249 113 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 UBE2CO00762 179 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 SOCS3O14543 225 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 MRPS12O15235 138 aaKnown RBP8.95□□□□□ -0.98
CHD4-203ENST00000535717 ZNF688P0C7X2 276 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 RPL35P42766 123 aaKnown RBP8.95□□□□□ -0.98
CHD4-203ENST00000535717 DEFB131AP59861 70 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 FFAR4Q5NUL3 377 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 DNLZQ5SXM8 178 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 RPL7L1Q6DKI1 246 aaKnown RBP8.95□□□□□ -0.98
CHD4-203ENST00000535717 HSD17B11Q8NBQ5 300 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 B9D2Q9BPU9 175 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 RNF24Q9Y225 148 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 TIMM9Q9Y5J7 89 aa8.95□□□□□ -0.98
CHD4-203ENST00000535717 KANTRA0A1W2PQU2 76 aa8.94□□□□□ -0.98
CHD4-203ENST00000535717 TMEM218A2RU14 115 aa8.94□□□□□ -0.98
CHD4-203ENST00000535717 RBMY1BA6NDE4 496 aaKnown RBP8.94□□□□□ -0.98
CHD4-203ENST00000535717 RBMY1EA6NEQ0 496 aaKnown RBP8.94□□□□□ -0.98
CHD4-203ENST00000535717 S100A9P06702 114 aaKnown RBP8.94□□□□□ -0.98
CHD4-203ENST00000535717 RBMY1DP0C7P1 496 aaKnown RBP8.94□□□□□ -0.98
CHD4-203ENST00000535717 ATP6V0CP27449 155 aa8.94□□□□□ -0.98
CHD4-203ENST00000535717 RNF212Q495C1 297 aa8.94□□□□□ -0.98
CHD4-203ENST00000535717 SPATA31B1PQ5VZV4 182 aa8.94□□□□□ -0.98
CHD4-203ENST00000535717 ALKAL2Q6UX46 152 aa8.94□□□□□ -0.98
CHD4-203ENST00000535717 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.94□□□□□ -0.98
CHD4-203ENST00000535717 LINC00322Q6ZN03 302 aaPredicted RBP8.94□□□□□ -0.98
CHD4-203ENST00000535717 PCNPQ8WW12 178 aaKnown RBP8.94□□□□□ -0.98
CHD4-203ENST00000535717 SEPSECSQ9HD40 501 aaKnown RBP8.94□□□□□ -0.98
CHD4-203ENST00000535717 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
CHD4-203ENST00000535717 A0A087X0K7 114 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 BORCS7-ASMTA0A0B4J1R7 106 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 TAAR5O14804 337 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 BCL2L11O43521 198 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 AKR1D1P51857 326 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 RAB5BP61020 215 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 SNRPD3P62318 126 aaKnown RBP8.93□□□□□ -0.98
CHD4-203ENST00000535717 PSMG4Q5JS54 123 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 FAM78BQ5VT40 261 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 MIR17HGQ75NE6 70 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 BPIFA4PQ86YQ2 179 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 SBSPONQ8IVN8 264 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 STOML3Q8TAV4 291 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 ASCL2Q99929 193 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 SEC11CQ9BY50 192 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 SH3BGRL3Q9H299 93 aa8.93□□□□□ -0.98
CHD4-203ENST00000535717 LINC00587B1AMM8 73 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 H3BQ15 152 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 ISLRO14498 428 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 JTBO76095 146 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 SNRPCP09234 159 aaKnown RBP8.92□□□□□ -0.98
CHD4-203ENST00000535717 IGLC2P0DOY2 106 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 ID1P41134 155 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 PSMB3P49720 205 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 RAB2AP61019 212 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 SAMD13Q5VXD3 122 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 OR2G3Q8NGZ4 309 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 FAM167A-AS1Q96KT0 104 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 C16orf92Q96LL3 132 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 PSMG3Q9BT73 122 aaPredicted RBP8.92□□□□□ -0.98
CHD4-203ENST00000535717 SLC25A2Q9BXI2 301 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 GSN-AS1Q9NRJ2 163 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 PPP1R14DQ9NXH3 145 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 FUT9Q9Y231 359 aa8.92□□□□□ -0.98
CHD4-203ENST00000535717 TENM3Q9P273 2699 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 TRAV8-2A0A0B4J237 113 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 C5orf52A6NGY3 159 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 KNCNA6PVL3 124 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 H3BTX0 84 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 BTF3P20290 206 aaKnown RBP8.91□□□□□ -0.98
CHD4-203ENST00000535717 HAGHQ16775 308 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 ACOT6Q3I5F7 207 aaPredicted RBP8.91□□□□□ -0.98
CHD4-203ENST00000535717 IGFL4Q6B9Z1 124 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 C15orf54Q8N8G6 183 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 GNPNAT1Q96EK6 184 aaPredicted RBP8.91□□□□□ -0.98
CHD4-203ENST00000535717 C20orf173Q96LM9 149 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 MRPL32Q9BYC8 188 aaKnown RBP8.91□□□□□ -0.98
CHD4-203ENST00000535717 HRH4Q9H3N8 390 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 TMEM14CQ9P0S9 112 aa8.91□□□□□ -0.98
CHD4-203ENST00000535717 LOC102724200A0A096LPH7 203 aaPredicted RBP8.9□□□□□ -0.98
CHD4-203ENST00000535717 EIF3GO75821 320 aaKnown RBP eCLIP8.9□□□□□ -0.98
CHD4-203ENST00000535717 PYYP10082 97 aa8.9□□□□□ -0.98
CHD4-203ENST00000535717 RPL35AP18077 110 aaKnown RBP8.9□□□□□ -0.98
CHD4-203ENST00000535717 DEFB1P60022 68 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 253.4 ms