RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 IGHV4-59P01825 116 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 IGHG4P01861 327 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 TYMSP04818 313 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 EDN2P20800 178 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 UBE2G1P62253 170 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 TMEM183BQ1AE95 376 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 OR1L6Q8NGR2 347 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 MLST8Q9BVC4 326 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 AGRNO00468 2067 aa7.1□□□□□ -1.27
LINC00943-203ENST00000535544 NDUFS8O00217 210 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 RPEL1Q2QD12 228 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 BPIFA4PQ86YQ2 179 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 RNF182Q8N6D2 247 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 HIST1H2BLQ99880 126 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
LINC00943-203ENST00000535544 MEGF9Q9H1U4 602 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 NIT2Q9NQR4 276 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 PPP1R2P9O14990 202 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 PAX1P15863 534 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 LINC00310P59036 64 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 YPEL3P61236 119 aaPredicted RBP7.09□□□□□ -1.27
LINC00943-203ENST00000535544 DEFB112Q30KQ8 113 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 C8orf49Q96NF6 230 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 ATG101Q9BSB4 218 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 KLF12Q9Y4X4 402 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 LY96Q9Y6Y9 160 aa7.09□□□□□ -1.27
LINC00943-203ENST00000535544 IGKV2-40A0A087WW87 121 aaPredicted RBP7.09□□□□□ -1.28
LINC00943-203ENST00000535544 SNURFLB1AK76 121 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 B4DSR2 109 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 IGKV2D-40P01614 121 aaPredicted RBP7.09□□□□□ -1.28
LINC00943-203ENST00000535544 CRIP1P50238 77 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 TAS2R60P59551 318 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 DEFB1P60022 68 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 UNQ9165/PRO28630Q6UXU0 137 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 C5orf17Q8NAS9 161 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 STXBP6Q8NFX7 210 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 TMEM68Q96MH6 324 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 MRPL18Q9H0U6 180 aaKnown RBP7.09□□□□□ -1.28
LINC00943-203ENST00000535544 OSTCQ9NRP0 149 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 MOB4Q9Y3A3 225 aa7.09□□□□□ -1.28
LINC00943-203ENST00000535544 TRAV41A0A0B4J266 112 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 PRAC2D3DTV9 90 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 AMBPP02760 352 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 RAB4BP61018 213 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 IL17RELQ6ZVW7 336 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 NUP35Q8NFH5 326 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 Q8TAT8 98 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 GTSF1Q8WW33 167 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 MBD6Q96DN6 1003 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 ZC2HC1AQ96GY0 325 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 GPR82Q96P67 336 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 ZFAND3Q9H8U3 227 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 GAR1Q9NY12 217 aaKnown RBP7.08□□□□□ -1.28
LINC00943-203ENST00000535544 THYN1Q9P016 225 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 TMEM14CQ9P0S9 112 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 JMJD1CQ15652 2540 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 SETXQ7Z333 2677 aaKnown RBP7.08□□□□□ -1.28
LINC00943-203ENST00000535544 SMIM27A0A1W2PRY6 76 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 LTAP01374 205 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 C19orf54Q5BKX5 351 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 Q6ZQT7 251 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 NEU1Q99519 415 aa7.08□□□□□ -1.28
LINC00943-203ENST00000535544 MUC21A0A0G2JKD1 596 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 MUC21A0A140T8X8 626 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 A6NDX4 124 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 HIGD1CA8MV81 97 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 CAMPP49913 170 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 SLAQ13239 276 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 MUC21Q5SSG8 566 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 OR4F17Q8NGA8 305 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 VGLL1Q99990 258 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 OTORQ9NRC9 128 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 GATCO43716 136 aaKnown RBP7.07□□□□□ -1.28
LINC00943-203ENST00000535544 TRGV3P03979 118 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 ERCC8Q13216 396 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 TMEM136Q6ZRR5 245 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 CMTM2Q8TAZ6 248 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 BTF3L4Q96K17 158 aa7.07□□□□□ -1.28
LINC00943-203ENST00000535544 TRAV30A0A087WSZ9 112 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 DIRC3C9JPN6 131 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 ZNF705DP0CH99 300 aaPredicted RBP7.06□□□□□ -1.28
LINC00943-203ENST00000535544 ZNF705BP0CI00 300 aaPredicted RBP7.06□□□□□ -1.28
LINC00943-203ENST00000535544 PPIFP30405 207 aaKnown RBP7.06□□□□□ -1.28
LINC00943-203ENST00000535544 Q86TA4 180 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 TMEM183AQ8IXX5 376 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 NAT8BQ9UHF3 227 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 PITPNC1Q9UKF7 332 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 IGKV3-7A0A075B6H7 116 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 TMSB15BA0A087X1C1 80 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 BUB3O43684 328 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 TPPP2P59282 170 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 OR5R1Q8NH85 324 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 PGLYRP4Q96LB8 373 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 PACRGQ96M98 296 aaPredicted RBP7.06□□□□□ -1.28
LINC00943-203ENST00000535544 ZNF48Q96MX3 618 aaPredicted RBP7.06□□□□□ -1.28
LINC00943-203ENST00000535544 RCHY1Q96PM5 261 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 RABAC1Q9UI14 185 aa7.06□□□□□ -1.28
LINC00943-203ENST00000535544 C19orf71A6NCJ1 209 aa7.05□□□□□ -1.28
LINC00943-203ENST00000535544 SMAD7O15105 426 aaKnown RBP7.05□□□□□ -1.28
LINC00943-203ENST00000535544 TGOLN2O43493 480 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms