RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 HMGN4O00479 90 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 SLC25A20O43772 301 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 BCE1O60756 84 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 IFI6P09912 130 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 CA6P23280 308 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 UBE2E1P51965 193 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 FKBP1AP62942 108 aaKnown RBP4.06□□□□□ -1.76
SNHG1-201ENST00000535076 FOXF2Q12947 444 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 DAZ2Q13117 558 aaKnown RBP4.06□□□□□ -1.76
SNHG1-201ENST00000535076 ERCC8Q13216 396 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 KCTD18Q6PI47 426 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-201ENST00000535076 DAZ4Q86SG3 579 aaKnown RBP4.06□□□□□ -1.76
SNHG1-201ENST00000535076 PCP2Q8IVA1 136 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 RPRMLQ8N4K4 120 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 C3orf56Q8N813 242 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 TAF15Q92804 592 aaKnown RBP eCLIP4.06□□□□□ -1.76
SNHG1-201ENST00000535076 UBE2E2Q96LR5 201 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 IGF2BP2-AS1Q96M15 143 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 PAXXQ9BUH6 204 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 LIME1Q9H400 295 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 NXT2Q9NPJ8 142 aaKnown RBP4.06□□□□□ -1.76
SNHG1-201ENST00000535076 DAZ3Q9NR90 486 aaKnown RBP4.06□□□□□ -1.76
SNHG1-201ENST00000535076 TAAR2Q9P1P5 351 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 LINC00527Q9UJ94 153 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 HHLA3Q9XRX5 114 aa4.06□□□□□ -1.76
SNHG1-201ENST00000535076 AMMECR1Q9Y4X0 333 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-201ENST00000535076 TRBV20OR9-2A0A075B6H5 130 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 TRBV7-3A0A075B6L6 115 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 IGHV1-58A0A0C4DH39 117 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 UBE2L5PA0A1B0GUS4 154 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 A0A1B0GXF2 115 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 hADV29S1A0JD25 119 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 C19orf71A6NCJ1 209 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 LYRM9A8MSI8 78 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 C17orf100A8MU93 164 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 CCL16O15467 120 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 SYNGR2O43760 224 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 EFNA2O43921 213 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 EPPINO95925 133 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 NGFP01138 241 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 UBE2D1P51668 147 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 ZNF136P52737 540 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 EFNA4P52798 201 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 CST6Q15828 149 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 C1orf140Q5VVS0 124 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 LYZL2Q7Z4W2 148 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 ZCCHC24Q8N2G6 241 aaKnown RBP4.05□□□□□ -1.76
SNHG1-201ENST00000535076 SLC22A24Q8N4F4 322 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 RAB42Q8N4Z0 105 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 DCAF4L2Q8NA75 395 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 CLEC4CQ8WTT0 213 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 SSMEM1Q8WWF3 244 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 Q96M85 177 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 DSCR8Q96T75 97 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 CALYQ9NYX4 217 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 PTPRBP23467 1997 aa4.05□□□□□ -1.76
SNHG1-201ENST00000535076 NCOA6Q14686 2063 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-201ENST00000535076 THSD7AQ9UPZ6 1657 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 IGKV6D-41A0A0C4DH26 115 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 PGPA6NDG6 321 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 LINC00473A8K010 186 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 C16orf97H3BN30 126 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 K7ERJ3 54 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 MRPS12O15235 138 aaKnown RBP4.04□□□□□ -1.76
SNHG1-201ENST00000535076 DUTP33316 252 aaKnown RBP4.04□□□□□ -1.76
SNHG1-201ENST00000535076 PSMB2P49721 201 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 ERVK-16P61578 105 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 RPL18Q07020 188 aaKnown RBP4.04□□□□□ -1.76
SNHG1-201ENST00000535076 ABCA11PQ4W5N1 156 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 LINC00305Q7Z4B0 112 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 ZNF799Q96GE5 643 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 TM2D3Q9BRN9 247 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 RPP25Q9BUL9 199 aaKnown RBP4.04□□□□□ -1.76
SNHG1-201ENST00000535076 PRRG4Q9BZD6 226 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 PRSS22Q9GZN4 317 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 FGF22Q9HCT0 170 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 DYNLRB1Q9NP97 96 aa4.04□□□□□ -1.76
SNHG1-201ENST00000535076 F11RQ9Y624 299 aaKnown RBP4.04□□□□□ -1.76
SNHG1-201ENST00000535076 COL16A1Q07092 1604 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-201ENST00000535076 TRBV10-2A0A0K0K1G8 114 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 H3BMM0 161 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 MGST3O14880 152 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 SS18L1O75177 396 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-201ENST00000535076 HBDP02042 147 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 MGST1P10620 155 aaKnown RBP4.03□□□□□ -1.76
SNHG1-201ENST00000535076 HMGA1P17096 107 aaKnown RBP4.03□□□□□ -1.76
SNHG1-201ENST00000535076 APOC4P55056 127 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 ADIGQ0VDE8 80 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 ZNF56Q15929 161 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 SP6Q3SY56 376 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 FAM104BQ5XKR9 115 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 SLC48A1Q6P1K1 146 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 NDUFA11Q86Y39 141 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 NT5CQ8TCD5 201 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 UBE2WQ96B02 151 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 GFRA4Q9GZZ7 299 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 DEFB127Q9H1M4 99 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 PLEKHA3Q9HB20 300 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 PHPT1Q9NRX4 125 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms