RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, human

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CA-208	ENST00000532446	CLLU1	Q5K131	121 aa		13.52	□□□□□ -0.25
PPP1CA-208	ENST00000532446	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.52	□□□□□ -0.25
PPP1CA-208	ENST00000532446	NRN1	Q9NPD7	142 aa		13.52	□□□□□ -0.25
PPP1CA-208	ENST00000532446	NOTCH3	Q9UM47	2321 aa		13.52	□□□□□ -0.25
PPP1CA-208	ENST00000532446	IGKV3-7	A0A075B6H7	116 aa		13.51	□□□□□ -0.25
PPP1CA-208	ENST00000532446	TRBV19	A0A075B6N1	114 aa		13.51	□□□□□ -0.25
PPP1CA-208	ENST00000532446	TRAV25	A0A0B4J276	109 aa		13.51	□□□□□ -0.25
PPP1CA-208	ENST00000532446		H3BTX0	84 aa		13.51	□□□□□ -0.25
PPP1CA-208	ENST00000532446	TSPAN4	O14817	238 aa		13.51	□□□□□ -0.25
PPP1CA-208	ENST00000532446	MEOX2	P50222	304 aa		13.51	□□□□□ -0.25
PPP1CA-208	ENST00000532446	OR2K2	Q8NGT1	345 aa		13.51	□□□□□ -0.25
PPP1CA-208	ENST00000532446	BLNK	Q8WV28	456 aa		13.51	□□□□□ -0.25
PPP1CA-208	ENST00000532446	IZUMO1R	A6ND01	250 aa		13.5	□□□□□ -0.25
PPP1CA-208	ENST00000532446	NDUFB4	O95168	129 aa		13.5	□□□□□ -0.25
PPP1CA-208	ENST00000532446	PMS2P11	Q13670	270 aa		13.5	□□□□□ -0.25
PPP1CA-208	ENST00000532446	PDE6H	Q13956	83 aa		13.5	□□□□□ -0.25
PPP1CA-208	ENST00000532446	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.5	□□□□□ -0.25
PPP1CA-208	ENST00000532446	MS4A6A	Q9H2W1	248 aa		13.5	□□□□□ -0.25
PPP1CA-208	ENST00000532446	SLC17A3	O00476	420 aa		13.49	□□□□□ -0.25
PPP1CA-208	ENST00000532446	ZNF253	O75346	499 aa		13.49	□□□□□ -0.25
PPP1CA-208	ENST00000532446	IGLL1	P15814	213 aa		13.49	□□□□□ -0.25
PPP1CA-208	ENST00000532446	PRR31	Q5SQ13	230 aa		13.49	□□□□□ -0.25
PPP1CA-208	ENST00000532446	GBGT1	Q8N5D6	347 aa		13.49	□□□□□ -0.25
PPP1CA-208	ENST00000532446	DCANP1	Q8TF63	244 aa		13.49	□□□□□ -0.25
PPP1CA-208	ENST00000532446	MGAM2	Q2M2H8	2515 aa		13.49	□□□□□ -0.25
PPP1CA-208	ENST00000532446	SOCS3	O14543	225 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	WIPF1	O43516	503 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	PPT1	P50897	306 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	CMYA5	Q8N3K9	4069 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	TRAV2	A0A0B4J234	112 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446		K7EQG2	157 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	PAFAH1B2	P68402	229 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	LCN12	Q6JVE5	192 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	SPAG8	Q99932	426 aa	Predicted RBP	13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	GNG13	Q9P2W3	67 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	PKD1L1	Q8TDX9	2849 aa		13.48	□□□□□ -0.25
PPP1CA-208	ENST00000532446	SORL1	Q92673	2214 aa		13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446		A0A1W2PRE2	83 aa		13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	DNASE2	O00115	360 aa	Predicted RBP	13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	UBE2G2	P60604	165 aa		13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	RAN	P62826	216 aa	Known RBP	13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	SAMD13	Q5VXD3	122 aa		13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	LYPD1	Q8N2G4	141 aa		13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	SLC50A1	Q9BRV3	221 aa		13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	MANBAL	Q9NQG1	85 aa		13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	ARL2-SNX15	V9GYD0	113 aa		13.47	□□□□□ -0.25
PPP1CA-208	ENST00000532446	TRAV8-2	A0A0B4J237	113 aa		13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	FAM74A7	A6NL05	159 aa		13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	PAGE4	O60829	102 aa		13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	TFPI2	P48307	235 aa		13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	PSG9	Q00887	426 aa		13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	WFDC3	Q8IUB2	231 aa		13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	C16orf92	Q96LL3	132 aa		13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	GPR61	Q9BZJ8	451 aa		13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.46	□□□□□ -0.25
PPP1CA-208	ENST00000532446	ISLR	O14498	428 aa		13.45	□□□□□ -0.26
PPP1CA-208	ENST00000532446		Q9H3A6	140 aa		13.45	□□□□□ -0.26
PPP1CA-208	ENST00000532446	OTOR	Q9NRC9	128 aa		13.45	□□□□□ -0.26
PPP1CA-208	ENST00000532446	IFNA1	P01562	189 aa		13.44	□□□□□ -0.26
PPP1CA-208	ENST00000532446	GUCA2B	Q16661	112 aa		13.44	□□□□□ -0.26
PPP1CA-208	ENST00000532446	HAGH	Q16775	308 aa		13.44	□□□□□ -0.26
PPP1CA-208	ENST00000532446	IGFL4	Q6B9Z1	124 aa		13.44	□□□□□ -0.26
PPP1CA-208	ENST00000532446	EXOC3-AS1	Q8N2X6	119 aa		13.44	□□□□□ -0.26
PPP1CA-208	ENST00000532446	FAM24B	Q8N5W8	94 aa		13.44	□□□□□ -0.26
PPP1CA-208	ENST00000532446	OR4C46	A6NHA9	309 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	GGTLC3	B5MD39	225 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	BCL2	P10415	239 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	HLA-DMB	P28068	263 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	ICAM4	Q14773	271 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	CST9LP1	Q5W188	147 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	RNF182	Q8N6D2	247 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	FAM210A	Q96ND0	272 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	NKX6-2	Q9C056	277 aa	Predicted RBP	13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	AAMDC	Q9H7C9	122 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	CLEC5A	Q9NY25	188 aa		13.43	□□□□□ -0.26
PPP1CA-208	ENST00000532446	LOC102723971	A0A1B0GUV8	181 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	PGP	A6NDG6	321 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	RBFOX3	A6NFN3	312 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	TAGLN2	P37802	199 aa	Known RBP	13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	ID1	P41134	155 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	SUMO1	P63165	101 aa	Known RBP	13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	BEAN1	Q3B7T3	259 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	OXLD1	Q5BKU9	147 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	C20orf173	Q96LM9	149 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	VAX2	Q9UIW0	290 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	ATP5G3	P48201	142 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	PSG3	Q16557	428 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	CCDC28A	Q8IWP9	274 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	RARRES2	Q99969	163 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	MED9	Q9NWA0	146 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446	PRELID1	Q9Y255	219 aa		13.42	□□□□□ -0.26
PPP1CA-208	ENST00000532446		M0R3E3	92 aa		13.41	□□□□□ -0.26
PPP1CA-208	ENST00000532446	ZNF688	P0C7X2	276 aa		13.41	□□□□□ -0.26
PPP1CA-208	ENST00000532446	SNRPD3	P62318	126 aa	Known RBP	13.41	□□□□□ -0.26
PPP1CA-208	ENST00000532446	MEF2B	Q02080	365 aa	Predicted RBP	13.41	□□□□□ -0.26
PPP1CA-208	ENST00000532446	TOR2A	Q5JU69	321 aa		13.41	□□□□□ -0.26
PPP1CA-208	ENST00000532446	ZNF506	Q5JVG8	444 aa		13.41	□□□□□ -0.26
PPP1CA-208	ENST00000532446	MRPL53	Q96EL3	112 aa	Known RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms