RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 PET100P0DJ07 73 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 SMIM18P0DKX4 95 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 F2RP25116 425 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 FGF9P31371 208 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 CRYBA4P53673 196 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 RPS20P60866 119 aaKnown RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 DAD1P61803 113 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 MSMO1Q15800 293 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 PHLDA2Q53GA4 152 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF705AQ6ZN79 300 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM144Q7Z5S9 345 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 HOGA1Q86XE5 327 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 C9orf62Q8N4C0 152 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 OR4A16Q8NH70 328 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 NRG4Q8WWG1 115 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM230Q96A57 120 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 SFRP2Q96HF1 295 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 MGLLQ99685 303 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 VPS25Q9BRG1 176 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 C1QTNF4Q9BXJ3 329 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 FXYD6Q9H0Q3 95 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 SLC35B3Q9H1N7 401 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ARV1Q9H2C2 271 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 RNF167Q9H6Y7 350 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ACOT13Q9NPJ3 140 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 EHFQ9NZC4 300 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 MDFICQ9P1T7 246 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 TRAV1-2A0A0B4J238 106 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 PIGBOS1A0A0B4J2F0 54 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM189A5PLL7 270 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 F6UB75 175 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF561-AS1K7EIQ3 104 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 SNAI2O43623 268 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 IGKV1-39P01597 117 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 PMP2P02689 132 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 C1QBP02746 253 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 SMR3BP02814 79 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 IGKV1D-39P04432 117 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 FGF2P09038 288 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 DEFB130BP0DP73 79 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 DEFB130AP0DP74 79 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 HLA-DRB4P13762 266 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 CRYBB3P26998 211 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ETV6P41212 452 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 SNRPD3P62318 126 aaKnown RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 PRCDQ00LT1 54 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 CLLU1Q5K131 121 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ACOT7LQ6ZUV0 252 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 NOXA1Q86UR1 476 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF114Q8NC26 417 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 OR4B1Q8NGF8 309 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 MARCH1Q8TCQ1 289 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 RBPMSQ93062 196 aaKnown RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 LINC00052Q96N35 136 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 C18orf15Q96N68 181 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 UHRF2Q96PU4 802 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 RSG1Q9BU20 258 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 C1orf43Q9BWL3 253 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 FNDC4Q9H6D8 234 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 LINC00588Q9Y4M8 146 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 HLA-DRB4X5D2U9 266 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 GAGE10A6NGK3 116 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 NPIPB6E9PJ23 425 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 F5H768 121 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 IGKV1-17P01599 117 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 HBE1P02100 147 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 RLN2P04090 185 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 IL7P13232 177 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 ID1P41134 155 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 OPRK1P41145 380 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 AKR1C3P42330 323 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 RFX2P48378 723 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 AQP4P55087 323 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 TIRAPP58753 221 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 SEC61GP60059 68 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 RAB5BP61020 215 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 ERHP84090 104 aaKnown RBP2.46□□□□□ -2.02
PTPRC-213ENST00000529828 DHODHQ02127 395 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 SSBP1Q04837 148 aaKnown RBP2.46□□□□□ -2.02
PTPRC-213ENST00000529828 MXD1Q05195 221 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 FCN2Q15485 313 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 GCSAMLQ5JQS6 135 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 CDPF1Q6NVV7 123 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 RNASEKQ6P5S7 137 aaKnown RBP2.46□□□□□ -2.02
PTPRC-213ENST00000529828 H2BFWTQ7Z2G1 175 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 COMMD7Q86VX2 200 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 C1orf158Q8N1D5 194 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 SLC35G3Q8N808 338 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 ZNF709Q8N972 641 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 C15orf53Q8NAA6 179 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 OR5AP2Q8NGF4 316 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 SLC25A38Q96DW6 304 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 FKBP11Q9NYL4 201 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 HSPB11Q9Y547 144 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 LRP2P98164 4655 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 TRAV26-1A0A087WT03 109 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 TEX48A0A1B0GUV7 120 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 ZNF705GA8MUZ8 300 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-213ENST00000529828 K7ERU9 68 aa2.46□□□□□ -2.02
PTPRC-213ENST00000529828 IL4P05112 153 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms